Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm44142-201ENSMUST00000203358 311 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim56Q80VI1 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm22220-201ENSMUST00000082671 149 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm24578-201ENSMUST00000103970 129 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Mir292-201ENSMUST00000104847 82 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm11625-201ENSMUST00000119535 296 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm16017-201ENSMUST00000119834 208 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm22208-201ENSMUST00000122658 110 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm14364-201ENSMUST00000129209 267 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm29134-201ENSMUST00000186579 126 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm28069-201ENSMUST00000189926 214 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm29332-201ENSMUST00000190829 227 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm28241-201ENSMUST00000190916 235 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm32536-201ENSMUST00000205209 445 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm44718-201ENSMUST00000206886 359 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm44648-201ENSMUST00000208267 329 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Snora52-201ENSMUST00000082732 137 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm22829-201ENSMUST00000083771 106 ntBASIC5.78□□□□□ -1.48
Trim56Q80VI1 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Trim56Q80VI1 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm24117-201ENSMUST00000103973 133 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm14517-201ENSMUST00000119040 337 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm11366-201ENSMUST00000119279 429 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm12704-201ENSMUST00000119789 464 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm14638-201ENSMUST00000121338 216 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm7840-201ENSMUST00000122086 533 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm22479-201ENSMUST00000122566 81 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm23206-201ENSMUST00000122720 184 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm27640-201ENSMUST00000184580 147 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm5734-201ENSMUST00000189787 913 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm17954-201ENSMUST00000195893 607 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm7751-201ENSMUST00000212868 709 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm46996-201ENSMUST00000220924 408 ntBASIC5.77□□□□□ -1.49
Trim56Q80VI1 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim56Q80VI1 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim56Q80VI1 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms