Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Ddx55Q6ZPL9 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Mir879-201ENSMUST00000104703 76 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm14751-201ENSMUST00000117693 222 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm25104-201ENSMUST00000122476 163 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm24441-201ENSMUST00000157235 281 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Mir7658-201ENSMUST00000184043 57 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm18160-201ENSMUST00000214279 827 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Ddx55Q6ZPL9 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm13728-201ENSMUST00000117471 400 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm11971-201ENSMUST00000117715 288 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm7429-201ENSMUST00000118664 348 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm15113-201ENSMUST00000119280 836 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm2318-201ENSMUST00000119623 639 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm13751-201ENSMUST00000120280 752 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm2768-201ENSMUST00000121062 250 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm13743-201ENSMUST00000121486 724 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm25177-201ENSMUST00000122634 117 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm25714-201ENSMUST00000158626 296 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm7398-201ENSMUST00000178589 639 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm16378-201ENSMUST00000179168 342 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm7375-201ENSMUST00000179232 639 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm5527-201ENSMUST00000179821 642 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm3681-201ENSMUST00000179940 639 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm25873-201ENSMUST00000180317 107 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm45539-201ENSMUST00000210313 428 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm5374-201ENSMUST00000222868 657 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.04□□□□□ -1.6
Ddx55Q6ZPL9 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Gm12340-201ENSMUST00000121617 462 ntBASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Gm22960-201ENSMUST00000122517 104 ntBASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Gm26347-201ENSMUST00000157526 131 ntBASIC5.03□□□□□ -1.6
Ddx55Q6ZPL9 Gm24402-201ENSMUST00000157873 91 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms