Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Rnf220Q6PDX6 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.63□□□□□ -1.67
Rnf220Q6PDX6 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Rnf220Q6PDX6 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Rnf220Q6PDX6 BC051076-202ENSMUST00000199477 2868 ntBASIC4.63□□□□□ -1.67
Rnf220Q6PDX6 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Rnf220Q6PDX6 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Rnf220Q6PDX6 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm6134-201ENSMUST00000117265 171 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm11429-201ENSMUST00000119089 144 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm11631-201ENSMUST00000119220 156 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm13932-201ENSMUST00000120873 610 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm12486-201ENSMUST00000120887 541 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm14530-201ENSMUST00000122391 333 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm24371-201ENSMUST00000122662 267 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm25806-201ENSMUST00000122782 122 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm13092-201ENSMUST00000136346 260 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm22378-201ENSMUST00000157481 111 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm22210-201ENSMUST00000158101 144 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm27028-201ENSMUST00000182303 399 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Mir7046-201ENSMUST00000183435 66 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm28263-201ENSMUST00000185884 400 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm44132-201ENSMUST00000205142 151 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm44571-201ENSMUST00000208092 533 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Rnf220Q6PDX6 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm14046-201ENSMUST00000119389 509 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm14008-201ENSMUST00000120483 274 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm11825-201ENSMUST00000120710 736 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm13000-201ENSMUST00000120937 496 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm16411-201ENSMUST00000122164 1100 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm6969-201ENSMUST00000140065 342 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm25152-201ENSMUST00000157117 114 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm22769-201ENSMUST00000158367 98 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm25037-201ENSMUST00000175418 110 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm27688-201ENSMUST00000183634 91 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm37658-201ENSMUST00000192672 315 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm37757-201ENSMUST00000193072 210 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 AC123665.4-201ENSMUST00000228790 249 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm22572-201ENSMUST00000082985 105 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Rnf220Q6PDX6 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rnf220Q6PDX6 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms