Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim28Q62318 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim28Q62318 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim28Q62318 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim28Q62318 Gm12873-201ENSMUST00000119988 422 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm7916-201ENSMUST00000120325 456 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm13973-201ENSMUST00000121371 894 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm13852-201ENSMUST00000122350 242 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm26354-201ENSMUST00000158221 129 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm22398-201ENSMUST00000174941 125 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm25731-201ENSMUST00000175167 125 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Mir6345-201ENSMUST00000184286 128 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim28Q62318 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim28Q62318 Trbv22-201ENSMUST00000191697 291 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm37837-201ENSMUST00000191743 604 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim28Q62318 Gm19908-201ENSMUST00000204684 391 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim28Q62318 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm45400-201ENSMUST00000211603 653 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 AC153971.2-201ENSMUST00000214553 777 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm7495-201ENSMUST00000215099 426 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm30738-201ENSMUST00000221346 502 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 AC116656.1-201ENSMUST00000227040 755 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim28Q62318 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim28Q62318 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Trim28Q62318 Gm10042-201ENSMUST00000079884 78 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim28Q62318 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim28Q62318 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim28Q62318 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim28Q62318 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim28Q62318 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim28Q62318 Gm25169-201ENSMUST00000104190 129 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm5757-201ENSMUST00000117494 528 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm13478-201ENSMUST00000118312 413 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm14881-201ENSMUST00000120366 372 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim28Q62318 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim28Q62318 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim28Q62318 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm43224-201ENSMUST00000201567 898 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm44910-201ENSMUST00000208451 396 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Trim28Q62318 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim28Q62318 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Trim28Q62318 Gm18225-201ENSMUST00000216708 742 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Trim28Q62318 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim28Q62318 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
Trim28Q62318 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim28Q62318 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim28Q62318 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim28Q62318 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim28Q62318 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.44□□□□□ -1.54
Trim28Q62318 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim28Q62318 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim28Q62318 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim28Q62318 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm22771-201ENSMUST00000104449 91 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm12386-201ENSMUST00000117380 688 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm12370-201ENSMUST00000117809 604 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm15493-201ENSMUST00000119461 528 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm14883-201ENSMUST00000120179 157 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm24385-201ENSMUST00000122694 350 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm23591-201ENSMUST00000157663 286 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm17154-201ENSMUST00000165748 431 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm21729-201ENSMUST00000180058 664 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm21853-201ENSMUST00000180071 664 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm9541-201ENSMUST00000188409 502 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm29495-201ENSMUST00000189319 664 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm38019-201ENSMUST00000195133 380 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm18971-201ENSMUST00000197240 374 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm8820-201ENSMUST00000204077 571 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm3189-201ENSMUST00000205595 832 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim28Q62318 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim28Q62318 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim28Q62318 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.43□□□□□ -1.54
Trim28Q62318 Gm26111-201ENSMUST00000083969 106 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms