Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Mir7012-201ENSMUST00000183900 64 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm28008-201ENSMUST00000184021 186 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm10105-201ENSMUST00000184601 270 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm42458-201ENSMUST00000201914 369 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 n-R5s50-201ENSMUST00000083168 111 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm25792-201ENSMUST00000083289 100 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm37661-201ENSMUST00000191863 1550 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm29488-201ENSMUST00000191427 2402 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 AC115289.2-201ENSMUST00000223836 2803 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm37101-201ENSMUST00000191656 3660 ntBASIC7.19□□□□□ -1.26
Scaf1Q5U4C3 Gm45853-201ENSMUST00000212310 3171 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Mir680-3-201ENSMUST00000102298 87 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm12765-201ENSMUST00000117273 615 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm14897-201ENSMUST00000118213 207 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm11229-201ENSMUST00000121993 437 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm22216-201ENSMUST00000157557 114 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm23902-201ENSMUST00000157571 134 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm17086-201ENSMUST00000171346 484 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm23806-201ENSMUST00000175157 109 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm24100-201ENSMUST00000178592 79 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm24137-201ENSMUST00000180055 79 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm22391-201ENSMUST00000180356 79 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm26731-201ENSMUST00000180683 543 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm45215-201ENSMUST00000206407 395 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 AC152979.3-201ENSMUST00000217720 479 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 AC122905.2-201ENSMUST00000220325 269 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm40692-201ENSMUST00000220411 491 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 AC164883.9-201ENSMUST00000228042 399 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm37051-201ENSMUST00000194535 2943 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm21379-201ENSMUST00000179772 1955 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm37738-201ENSMUST00000192396 4716 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm38125-201ENSMUST00000194136 3438 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm19035-201ENSMUST00000193299 1742 ntBASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf1Q5U4C3 Gm28634-201ENSMUST00000191087 2613 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm37802-201ENSMUST00000194998 2643 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm22021-201ENSMUST00000104353 107 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm12486-201ENSMUST00000120887 541 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm22725-201ENSMUST00000158092 110 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm17152-201ENSMUST00000172430 535 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm24518-201ENSMUST00000180275 94 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Mir6412-201ENSMUST00000184477 97 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 CT025606.1-201ENSMUST00000218273 324 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 CT030242.3-201ENSMUST00000221231 581 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 AC154270.1-201ENSMUST00000227226 426 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Olfr197-201ENSMUST00000080031 926 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Snord42a-201ENSMUST00000082606 65 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Gm23514-201ENSMUST00000082827 130 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Scaf1Q5U4C3 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm45555-201ENSMUST00000210028 2602 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm44751-201ENSMUST00000208302 4387 ntBASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Scaf1Q5U4C3 Gm3675-201ENSMUST00000175904 1653 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms