Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm8734-201ENSMUST00000211669 1312 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trav3-1Q5R1I8 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm14772-201ENSMUST00000116562 514 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm14142-201ENSMUST00000117833 296 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm13873-201ENSMUST00000119208 427 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm11483-201ENSMUST00000119839 247 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm13220-201ENSMUST00000121535 508 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm11931-201ENSMUST00000121630 447 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm22345-201ENSMUST00000122644 107 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm23599-201ENSMUST00000157261 251 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm23671-201ENSMUST00000157472 103 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm24239-201ENSMUST00000157791 255 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm27921-201ENSMUST00000183968 108 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Mir1957b-201ENSMUST00000184608 123 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm37281-201ENSMUST00000192412 439 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm37698-201ENSMUST00000192605 463 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm43393-201ENSMUST00000200147 194 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm45048-201ENSMUST00000207058 429 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm20039-201ENSMUST00000210329 394 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm45588-201ENSMUST00000211213 630 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm39147-201ENSMUST00000211376 465 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm9174-201ENSMUST00000078149 255 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav3-1Q5R1I8 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm22473-201ENSMUST00000104114 132 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm24280-201ENSMUST00000104237 134 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm26376-201ENSMUST00000104784 110 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm14750-201ENSMUST00000118262 516 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm13156-201ENSMUST00000118348 321 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm15106-201ENSMUST00000119691 821 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm7846-201ENSMUST00000145844 274 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm6265-201ENSMUST00000149263 231 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm22536-201ENSMUST00000158171 134 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm23028-201ENSMUST00000158773 265 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm7241-201ENSMUST00000159853 357 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm27468-201ENSMUST00000183577 106 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm8669-201ENSMUST00000183839 945 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Mir7115-201ENSMUST00000184275 64 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm27330-201ENSMUST00000184689 132 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm5731-201ENSMUST00000190969 481 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm9696-202ENSMUST00000191541 830 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm38334-201ENSMUST00000195060 313 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm36997-201ENSMUST00000195090 707 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm43237-201ENSMUST00000196835 1044 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm42619-201ENSMUST00000197564 1136 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm42652-201ENSMUST00000199073 614 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm8745-201ENSMUST00000207846 782 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm45162-201ENSMUST00000209013 618 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm7751-201ENSMUST00000212868 709 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm34005-201ENSMUST00000215834 282 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AC161114.1-201ENSMUST00000218223 474 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm7198-201ENSMUST00000219635 1074 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AC121804.1-201ENSMUST00000221016 394 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AC154806.4-201ENSMUST00000227406 439 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AC130673.2-201ENSMUST00000228091 797 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 AC112142.1-206ENSMUST00000228136 982 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Gm23514-201ENSMUST00000082827 130 ntBASIC2.14□□□□□ -2.07
Trav3-1Q5R1I8 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms