Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm18719-201ENSMUST00000196696 1413 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm24119-201ENSMUST00000103979 246 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm24376-201ENSMUST00000104399 127 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm11576-201ENSMUST00000117433 417 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm13803-201ENSMUST00000117547 489 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm13122-201ENSMUST00000118380 453 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm15190-201ENSMUST00000120855 276 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm15367-201ENSMUST00000122398 1016 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm24720-201ENSMUST00000157518 166 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm26045-201ENSMUST00000157862 97 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm24730-201ENSMUST00000158228 117 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm20672-201ENSMUST00000176605 261 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28339-201ENSMUST00000185845 696 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm43476-201ENSMUST00000197873 405 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm6230-201ENSMUST00000208077 780 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm44594-201ENSMUST00000208982 407 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 AC162376.1-201ENSMUST00000220120 435 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 AC151730.2-201ENSMUST00000224027 475 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Gm43259-201ENSMUST00000198446 3277 ntBASIC2.69□□□□□ -1.98
Trav6d-4Q5R1I0 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 AC154634.4-201ENSMUST00000226077 2665 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm22023-201ENSMUST00000104354 130 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm24831-201ENSMUST00000116778 126 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm26001-201ENSMUST00000157989 103 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Mir5127-201ENSMUST00000175295 71 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm27893-201ENSMUST00000184408 194 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Mir6914-201ENSMUST00000184999 69 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28574-201ENSMUST00000185757 699 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28781-201ENSMUST00000185760 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28596-201ENSMUST00000185870 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm29062-201ENSMUST00000186032 694 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm29574-201ENSMUST00000186226 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28828-201ENSMUST00000186601 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28057-201ENSMUST00000186603 615 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28255-201ENSMUST00000187101 694 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm29307-201ENSMUST00000187367 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28397-201ENSMUST00000187970 699 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28896-201ENSMUST00000188609 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm29545-201ENSMUST00000188878 694 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm29339-201ENSMUST00000189613 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm28159-201ENSMUST00000190296 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm29366-201ENSMUST00000190481 699 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm29407-201ENSMUST00000191468 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm32295-201ENSMUST00000192558 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm37433-201ENSMUST00000192695 678 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm18900-201ENSMUST00000193218 584 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm31260-201ENSMUST00000193478 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm37441-201ENSMUST00000194430 678 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm38107-201ENSMUST00000194873 696 ntBASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trav6d-4Q5R1I0 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms