Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm23501-201ENSMUST00000157744 256 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm24939-201ENSMUST00000158325 137 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm24976-201ENSMUST00000158972 135 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm8161-201ENSMUST00000168739 481 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm29428-201ENSMUST00000190086 409 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm18340-201ENSMUST00000196342 609 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm4644-201ENSMUST00000197587 400 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Trdv3-201ENSMUST00000198551 309 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm4045-201ENSMUST00000204076 310 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm19244-201ENSMUST00000204340 253 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm8035-201ENSMUST00000204625 687 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 CR974429.1-201ENSMUST00000220877 827 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm19134-201ENSMUST00000221203 487 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm22826-201ENSMUST00000083774 165 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm37668-201ENSMUST00000193745 1944 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 AC154184.1-201ENSMUST00000224375 1620 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm9597-202ENSMUST00000227632 1387 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm23532-201ENSMUST00000104569 112 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Mir294-201ENSMUST00000104710 84 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm12173-201ENSMUST00000117622 273 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm23505-201ENSMUST00000158989 130 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm17204-201ENSMUST00000167936 478 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm18128-201ENSMUST00000172625 511 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Mir6414-201ENSMUST00000183685 82 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm10925-201ENSMUST00000189941 678 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm5829-201ENSMUST00000191383 351 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm37428-201ENSMUST00000193886 137 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm18327-201ENSMUST00000202426 830 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm45727-201ENSMUST00000212886 572 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 CT025689.2-201ENSMUST00000224979 429 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 AC174459.2-201ENSMUST00000226036 160 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.8□□□□□ -1.96
Trav3-3Q5R1C3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm23014-201ENSMUST00000104144 130 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 n-R5s16-201ENSMUST00000104555 119 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm12739-201ENSMUST00000119769 382 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm14534-201ENSMUST00000120045 357 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm6591-201ENSMUST00000121063 434 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm16359-201ENSMUST00000124511 289 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm24444-201ENSMUST00000157244 308 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm23312-201ENSMUST00000158774 102 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm24520-201ENSMUST00000179510 110 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm25942-201ENSMUST00000180080 110 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm25412-201ENSMUST00000180258 107 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm8604-201ENSMUST00000183150 965 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm27163-201ENSMUST00000184767 409 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm43155-201ENSMUST00000202661 494 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm19253-201ENSMUST00000204279 307 ntBASIC2.79□□□□□ -1.96
Trav3-3Q5R1C3 Gm44650-201ENSMUST00000206929 194 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms