Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm11408-201ENSMUST00000117889 519 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm15508-201ENSMUST00000160330 325 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Atp2b4-208ENSMUST00000167348 243 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm37097-201ENSMUST00000193676 336 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm5552-201ENSMUST00000197149 515 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm43308-201ENSMUST00000197236 373 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm43090-201ENSMUST00000202459 314 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm44554-201ENSMUST00000208738 147 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm3690-201ENSMUST00000211341 262 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm17917-201ENSMUST00000218561 953 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm24917-201ENSMUST00000083935 104 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm44150-201ENSMUST00000203317 2619 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Gm42479-201ENSMUST00000198654 1356 ntBASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm12568-201ENSMUST00000117362 624 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm13379-201ENSMUST00000118053 621 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm15719-201ENSMUST00000120619 635 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm24745-201ENSMUST00000157840 85 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm10075-201ENSMUST00000162030 545 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm25817-201ENSMUST00000177758 121 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm24766-201ENSMUST00000179182 121 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm26988-201ENSMUST00000183296 945 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm37164-201ENSMUST00000192809 637 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm38234-201ENSMUST00000195204 421 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 AC131743.3-201ENSMUST00000222099 662 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Trim58Q5NCC9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm25317-201ENSMUST00000116824 129 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm14621-201ENSMUST00000117709 689 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm11350-201ENSMUST00000121436 870 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm26001-201ENSMUST00000157989 103 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm6374-201ENSMUST00000159051 788 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm42516-201ENSMUST00000198691 767 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm7380-201ENSMUST00000211599 466 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm18116-201ENSMUST00000220920 537 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 AC115357.1-201ENSMUST00000227575 466 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm23407-201ENSMUST00000082538 91 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm26203-201ENSMUST00000082911 114 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.24□□□□□ -1.73
Trim58Q5NCC9 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms