Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm7618-201ENSMUST00000121643 171 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm22453-201ENSMUST00000122801 318 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm16589-201ENSMUST00000159522 918 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm16147-201ENSMUST00000162143 373 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm8498-201ENSMUST00000188227 974 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm19418-201ENSMUST00000197436 580 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm42814-201ENSMUST00000199370 460 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm14898-201ENSMUST00000120202 645 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm23465-201ENSMUST00000157134 262 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm23905-201ENSMUST00000157568 109 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Scarna6-201ENSMUST00000158656 265 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm17030-201ENSMUST00000167016 393 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Mir7006-201ENSMUST00000183624 69 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm27564-201ENSMUST00000185196 96 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm37438-201ENSMUST00000192813 393 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm37533-201ENSMUST00000193848 545 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm9632-201ENSMUST00000195934 643 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm4644-201ENSMUST00000197587 400 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm34224-201ENSMUST00000204606 364 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm44830-201ENSMUST00000207667 584 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.62□□□□□ -1.83
Trim40Q3UWA4 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm11698-201ENSMUST00000117948 455 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm15116-201ENSMUST00000122248 663 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm24014-201ENSMUST00000157728 157 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm23198-201ENSMUST00000158811 91 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm24976-201ENSMUST00000158972 135 ntBASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim40Q3UWA4 Gm6113-201ENSMUST00000180319 639 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms