Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm22501-201ENSMUST00000158981 127 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm20526-201ENSMUST00000173416 158 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm37097-201ENSMUST00000193676 336 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm38332-201ENSMUST00000194189 147 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm18747-201ENSMUST00000198129 648 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm19726-201ENSMUST00000205008 240 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm45701-201ENSMUST00000212049 235 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm10242-201ENSMUST00000090064 330 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Gm24581-201ENSMUST00000103962 133 ntBASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Gm26371-201ENSMUST00000157829 104 ntBASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Gm28594-201ENSMUST00000187022 661 ntBASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Olfr936-202ENSMUST00000216912 937 ntBASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.67□□□□□ -1.82
Upf3bQ3ULL6 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm22488-201ENSMUST00000116811 127 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm12025-201ENSMUST00000117768 144 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm14383-201ENSMUST00000121637 386 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm25971-201ENSMUST00000158953 286 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Mir5127-201ENSMUST00000175295 71 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm28654-201ENSMUST00000189801 379 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm36943-201ENSMUST00000194422 282 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm45080-201ENSMUST00000206648 283 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm21007-201ENSMUST00000221024 326 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm2710-201ENSMUST00000073196 603 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Snord35b-201ENSMUST00000082833 87 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Snora70-201ENSMUST00000083047 137 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Upf3bQ3ULL6 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.65□□□□□ -1.82
Upf3bQ3ULL6 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Upf3bQ3ULL6 Gm23530-201ENSMUST00000104564 137 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm13076-201ENSMUST00000118041 204 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm5384-201ENSMUST00000120313 463 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm25967-201ENSMUST00000157168 147 ntBASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.65□□□□□ -1.83
Upf3bQ3ULL6 Gm43308-201ENSMUST00000197236 373 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms