Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rnf180Q3U827 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.42□□□□□ -1.54
Rnf180Q3U827 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rnf180Q3U827 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.42□□□□□ -1.54
Rnf180Q3U827 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Rnf180Q3U827 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.42□□□□□ -1.54
Rnf180Q3U827 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm6429-201ENSMUST00000117144 475 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm13172-201ENSMUST00000118685 256 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm22514-201ENSMUST00000122547 308 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm8161-201ENSMUST00000168739 481 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rnf180Q3U827 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm36964-201ENSMUST00000191876 198 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm37343-201ENSMUST00000192542 111 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm37636-201ENSMUST00000193583 359 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm23736-201ENSMUST00000082553 75 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm23097-201ENSMUST00000083448 105 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rnf180Q3U827 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rnf180Q3U827 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.41□□□□□ -1.54
Rnf180Q3U827 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rnf180Q3U827 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm24430-201ENSMUST00000104077 104 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm15493-201ENSMUST00000119461 528 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm24724-201ENSMUST00000158230 107 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm22841-201ENSMUST00000158443 62 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm23365-201ENSMUST00000175019 125 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm25960-201ENSMUST00000175110 125 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm44453-201ENSMUST00000175161 126 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm25195-201ENSMUST00000177656 126 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm38185-201ENSMUST00000193195 694 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Igkv12-49-201ENSMUST00000197714 278 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm45063-201ENSMUST00000203726 472 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Gm44600-201ENSMUST00000208540 111 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Rnf180Q3U827 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.4□□□□□ -1.54
Rnf180Q3U827 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.4□□□□□ -1.55
Rnf180Q3U827 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Rnf180Q3U827 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.39□□□□□ -1.55
Rnf180Q3U827 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rnf180Q3U827 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rnf180Q3U827 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.39□□□□□ -1.55
Rnf180Q3U827 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.39□□□□□ -1.55
Rnf180Q3U827 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Rnf180Q3U827 Mir208b-201ENSMUST00000104735 77 ntBASIC5.39□□□□□ -1.55
Rnf180Q3U827 Gm14299-201ENSMUST00000117586 397 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms