Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm21729-201ENSMUST00000180058 664 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm21853-201ENSMUST00000180071 664 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm27332-201ENSMUST00000184893 112 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm4854-201ENSMUST00000185902 574 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm29495-201ENSMUST00000189319 664 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm43828-201ENSMUST00000196890 639 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm42958-201ENSMUST00000197595 318 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm45006-201ENSMUST00000206078 690 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm44654-201ENSMUST00000208052 329 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm44857-201ENSMUST00000208331 196 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm4921-201ENSMUST00000219804 992 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Mecom-201ENSMUST00000061088 348 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm7204-201ENSMUST00000062591 600 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Snord22-201ENSMUST00000083153 126 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm23452-201ENSMUST00000083327 107 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm24765-201ENSMUST00000083691 103 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm45872-201ENSMUST00000209804 1584 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm11488-201ENSMUST00000117277 863 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm11878-201ENSMUST00000117908 400 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm12294-201ENSMUST00000119723 490 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm14982-201ENSMUST00000121102 442 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm22199-201ENSMUST00000122660 126 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm23465-201ENSMUST00000157134 262 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm24689-201ENSMUST00000157760 104 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm24898-201ENSMUST00000158133 106 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm3084-201ENSMUST00000169967 598 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm23269-201ENSMUST00000178701 107 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm21070-201ENSMUST00000182425 985 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Mir6411-201ENSMUST00000183556 108 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm27165-201ENSMUST00000183951 232 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm28628-201ENSMUST00000187006 264 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm29563-201ENSMUST00000187249 496 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm29196-201ENSMUST00000189239 618 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm20811-201ENSMUST00000190500 553 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm43856-201ENSMUST00000197004 369 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm42539-201ENSMUST00000197009 308 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm43144-201ENSMUST00000198256 485 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm43441-201ENSMUST00000201458 205 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm45226-201ENSMUST00000206602 288 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm44852-201ENSMUST00000207950 369 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 AC155314.1-201ENSMUST00000227624 508 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm24207-201ENSMUST00000082781 108 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm23242-201ENSMUST00000083055 107 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col28a1Q2UY11 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Col28a1Q2UY11 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Col28a1Q2UY11 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.21□□□□□ -1.73
Col28a1Q2UY11 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.21□□□□□ -1.73
Col28a1Q2UY11 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Col28a1Q2UY11 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
Col28a1Q2UY11 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.21□□□□□ -1.74
Col28a1Q2UY11 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col28a1Q2UY11 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col28a1Q2UY11 Gm23594-201ENSMUST00000104307 134 ntBASIC4.21□□□□□ -1.74
Col28a1Q2UY11 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.21□□□□□ -1.74
Col28a1Q2UY11 Igkv13-87-201ENSMUST00000114214 286 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms