Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm17711-201ENSMUST00000172028 237 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm19203-201ENSMUST00000174049 939 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm26993-201ENSMUST00000182766 789 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm4322-201ENSMUST00000191094 336 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm36991-201ENSMUST00000191800 648 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm44477-201ENSMUST00000199661 110 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm8423-201ENSMUST00000211387 607 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm45540-201ENSMUST00000209271 3606 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm20651-201ENSMUST00000177219 329 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm38166-201ENSMUST00000191660 471 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm21112-201ENSMUST00000212224 578 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm7760-201ENSMUST00000212265 578 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm25421-201ENSMUST00000104218 164 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm24067-201ENSMUST00000104514 85 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm13588-201ENSMUST00000120026 135 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm8880-201ENSMUST00000121800 454 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm27379-201ENSMUST00000183730 123 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm38088-201ENSMUST00000195829 241 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 AC127578.1-201ENSMUST00000227289 93 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm37531-201ENSMUST00000191628 5415 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm37244-201ENSMUST00000191748 1981 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm15180-201ENSMUST00000117745 492 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm6444-201ENSMUST00000119611 458 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm24240-201ENSMUST00000157785 135 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Mir7225-201ENSMUST00000184178 54 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 AC134468.2-201ENSMUST00000222549 672 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 AC163631.1-201ENSMUST00000225041 598 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm43369-201ENSMUST00000196373 1552 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 AC154257.1-201ENSMUST00000224811 1525 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 AC155830.1-201ENSMUST00000220050 3836 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm12118-201ENSMUST00000119766 532 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm25967-201ENSMUST00000157168 147 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Gm9587-201ENSMUST00000172449 454 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Mir6398-201ENSMUST00000184541 102 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ush2AQ2QI47 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm43875-201ENSMUST00000203319 2475 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm15975-201ENSMUST00000122385 1402 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 AC165260.6-205ENSMUST00000224190 9762 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm27399-201ENSMUST00000184250 78 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm44408-201ENSMUST00000200205 66 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm8209-201ENSMUST00000206386 553 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm13459-201ENSMUST00000121558 646 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm28639-201ENSMUST00000191519 481 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm43848-201ENSMUST00000198060 1247 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm44582-201ENSMUST00000209125 445 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 AC154510.1-201ENSMUST00000223925 737 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm44530-201ENSMUST00000207920 3559 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Gm28030-201ENSMUST00000184987 138 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 AC171206.2-201ENSMUST00000215252 389 ntBASIC1.68□□□□□ -2.14
Ush2AQ2QI47 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms