Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm27317-201ENSMUST00000183533 95 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm27236-201ENSMUST00000184147 442 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm38109-201ENSMUST00000195386 181 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC6.39□□□□□ -1.39
Col17a1Q07563 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm22971-201ENSMUST00000083305 97 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Snord7-201ENSMUST00000083781 97 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col17a1Q07563 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm38083-201ENSMUST00000194758 3498 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col17a1Q07563 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col17a1Q07563 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col17a1Q07563 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 BC055308-201ENSMUST00000193380 2538 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm18180-201ENSMUST00000187562 1484 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm6913-201ENSMUST00000100019 348 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm23942-201ENSMUST00000101956 107 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm14575-201ENSMUST00000117210 560 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm13803-201ENSMUST00000117547 489 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm2003-201ENSMUST00000118537 636 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm7308-201ENSMUST00000121087 447 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm1989-201ENSMUST00000126244 636 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm23587-201ENSMUST00000157658 84 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC6.38□□□□□ -1.39
Col17a1Q07563 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Mir6938-201ENSMUST00000184173 63 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm17811-201ENSMUST00000206193 387 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC6.38□□□□□ -1.39
Col17a1Q07563 AC153541.1-201ENSMUST00000213786 294 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm9973-202ENSMUST00000220926 166 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 AC117237.1-201ENSMUST00000224035 395 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 AC174797.3-202ENSMUST00000224578 587 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm26064-201ENSMUST00000083381 109 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm37461-201ENSMUST00000193929 3704 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col17a1Q07563 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col17a1Q07563 Gm37488-201ENSMUST00000195434 3374 ntBASIC6.38□□□□□ -1.39
Col17a1Q07563 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Col17a1Q07563 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col17a1Q07563 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col17a1Q07563 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col17a1Q07563 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col17a1Q07563 Mir582-201ENSMUST00000103758 81 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm13614-201ENSMUST00000117306 503 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm12770-201ENSMUST00000121734 462 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm13024-201ENSMUST00000121756 718 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm24385-201ENSMUST00000122694 350 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm37869-201ENSMUST00000193385 595 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm38041-201ENSMUST00000194445 661 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm17779-201ENSMUST00000213395 394 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 AC115750.1-201ENSMUST00000220441 567 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 AC129085.3-201ENSMUST00000225686 1705 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Col17a1Q07563 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Col17a1Q07563 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col17a1Q07563 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm37345-201ENSMUST00000193062 3138 ntBASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC6.37□□□□□ -1.39
Col17a1Q07563 Gm14442-201ENSMUST00000119690 1736 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 AC104897.1-201ENSMUST00000222638 3628 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm24318-201ENSMUST00000104490 131 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm13482-201ENSMUST00000119842 254 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm24198-201ENSMUST00000157812 108 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm22664-201ENSMUST00000158719 105 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm26746-201ENSMUST00000181722 487 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm29263-201ENSMUST00000188718 463 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm4644-201ENSMUST00000197587 400 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm44989-201ENSMUST00000204749 217 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 AC116726.2-201ENSMUST00000217629 986 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 AC142499.1-201ENSMUST00000220036 374 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Gm9370-201ENSMUST00000222787 609 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 AC158392.2-201ENSMUST00000225402 969 ntBASIC6.36□□□□□ -1.39
Col17a1Q07563 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col17a1Q07563 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col17a1Q07563 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col17a1Q07563 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col17a1Q07563 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col17a1Q07563 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col17a1Q07563 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms