Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a1Q04857 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm9850-201ENSMUST00000117916 227 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm11268-201ENSMUST00000118347 267 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm5942-201ENSMUST00000120046 439 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm11829-201ENSMUST00000121003 282 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm26256-201ENSMUST00000122499 186 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm26034-201ENSMUST00000158154 116 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm22765-201ENSMUST00000158371 128 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm5558-201ENSMUST00000178933 495 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm28951-201ENSMUST00000190742 313 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm29038-201ENSMUST00000191543 678 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm36891-201ENSMUST00000191995 655 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm38008-201ENSMUST00000195333 518 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Mir6516-201ENSMUST00000196236 110 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm42621-201ENSMUST00000198114 275 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm42459-201ENSMUST00000199679 742 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm45402-201ENSMUST00000211796 223 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm5215-201ENSMUST00000054380 405 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Gm23503-201ENSMUST00000083903 107 ntBASIC5.65□□□□□ -1.5
Col6a1Q04857 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a1Q04857 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.65□□□□□ -1.51
Col6a1Q04857 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.65□□□□□ -1.51
Col6a1Q04857 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a1Q04857 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm22493-201ENSMUST00000104494 132 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm7840-201ENSMUST00000122086 533 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm15075-201ENSMUST00000122187 477 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm22073-201ENSMUST00000122668 189 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm25966-201ENSMUST00000157169 117 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm24113-201ENSMUST00000157477 276 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm25982-201ENSMUST00000157920 101 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm23579-201ENSMUST00000158528 103 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm21978-201ENSMUST00000179696 377 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm29231-201ENSMUST00000179850 319 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm2623-201ENSMUST00000199229 286 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm24622-201ENSMUST00000082619 162 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.64□□□□□ -1.51
Col6a1Q04857 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a1Q04857 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a1Q04857 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.63□□□□□ -1.51
Col6a1Q04857 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a1Q04857 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a1Q04857 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms