Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm22108-201ENSMUST00000177961 106 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cdx2P43241 Gm24798-201ENSMUST00000179334 106 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.26□□□□□ -1.89
Cdx2P43241 Gm18843-201ENSMUST00000194982 719 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cdx2P43241 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.26□□□□□ -1.89
Cdx2P43241 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cdx2P43241 Gm9845-201ENSMUST00000056409 598 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx2P43241 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Cdx2P43241 Snora31-201ENSMUST00000083213 130 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Gm25581-201ENSMUST00000083410 164 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx2P43241 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx2P43241 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx2P43241 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Cdx2P43241 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx2P43241 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx2P43241 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Cdx2P43241 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx2P43241 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.25□□□□□ -1.89
Cdx2P43241 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Cdx2P43241 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cdx2P43241 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cdx2P43241 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cdx2P43241 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Cdx2P43241 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdx2P43241 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cdx2P43241 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Cdx2P43241 Gm11576-201ENSMUST00000117433 417 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm14119-201ENSMUST00000119511 235 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm14581-201ENSMUST00000121726 198 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm16471-201ENSMUST00000121940 618 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm12998-201ENSMUST00000122445 789 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.25□□□□□ -1.89
Cdx2P43241 Gm6265-201ENSMUST00000149263 231 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm23257-201ENSMUST00000158322 132 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm23824-201ENSMUST00000158741 276 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.25□□□□□ -1.89
Cdx2P43241 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Cdx2P43241 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm38008-201ENSMUST00000195333 518 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm44607-201ENSMUST00000205611 1090 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm44690-201ENSMUST00000207984 382 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm18672-201ENSMUST00000208035 270 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.25□□□□□ -1.89
Cdx2P43241 Gm26129-201ENSMUST00000082719 107 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cdx2P43241 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cdx2P43241 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.25□□□□□ -1.89
Cdx2P43241 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx2P43241 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Gm8840-201ENSMUST00000122454 386 ntBASIC3.24□□□□□ -1.89
Cdx2P43241 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx2P43241 Gm23592-201ENSMUST00000157859 117 ntBASIC3.24□□□□□ -1.89
Cdx2P43241 Gm24734-201ENSMUST00000158860 262 ntBASIC3.24□□□□□ -1.89
Cdx2P43241 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdx2P43241 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.24□□□□□ -1.89
Cdx2P43241 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdx2P43241 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.24□□□□□ -1.89
Cdx2P43241 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.24□□□□□ -1.89
Cdx2P43241 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx2P43241 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cdx2P43241 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdx2P43241 BC023105-201ENSMUST00000073997 1227 ntBASIC3.24□□□□□ -1.89
Cdx2P43241 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdx2P43241 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Cdx2P43241 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.24□□□□□ -1.89
Cdx2P43241 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.23□□□□□ -1.89
Cdx2P43241 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdx2P43241 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdx2P43241 Gm11673-201ENSMUST00000117846 331 ntBASIC3.23□□□□□ -1.89
Cdx2P43241 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.23□□□□□ -1.89
Cdx2P43241 Gm11896-201ENSMUST00000121105 820 ntBASIC3.23□□□□□ -1.89
Cdx2P43241 Gm15986-201ENSMUST00000122153 400 ntBASIC3.23□□□□□ -1.89
Cdx2P43241 Gm12819-201ENSMUST00000122223 629 ntBASIC3.23□□□□□ -1.89
Cdx2P43241 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdx2P43241 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdx2P43241 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.23□□□□□ -1.89
Cdx2P43241 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdx2P43241 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdx2P43241 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdx2P43241 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms