Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.09□□□□□ -1.59
Usp4P35123 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.09□□□□□ -1.59
Usp4P35123 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Usp4P35123 Gm23093-201ENSMUST00000083450 102 ntBASIC5.09□□□□□ -1.59
Usp4P35123 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.09□□□□□ -1.59
Usp4P35123 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Usp4P35123 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.09□□□□□ -1.59
Usp4P35123 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Usp4P35123 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.09□□□□□ -1.6
Usp4P35123 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.09□□□□□ -1.6
Usp4P35123 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Usp4P35123 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Usp4P35123 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Usp4P35123 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm25213-201ENSMUST00000102388 113 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Mir676-201ENSMUST00000102443 89 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm22272-201ENSMUST00000104039 134 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 Gm24835-201ENSMUST00000116777 111 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm13627-201ENSMUST00000119700 706 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm14362-201ENSMUST00000121679 273 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm15254-201ENSMUST00000149567 273 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm25865-201ENSMUST00000158247 104 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm16134-201ENSMUST00000161714 336 ntBASIC5.08□□□□□ -1.6
Usp4P35123 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm8649-201ENSMUST00000181799 233 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm28146-201ENSMUST00000185517 701 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm28574-201ENSMUST00000185757 699 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm28397-201ENSMUST00000187970 699 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.08□□□□□ -1.6
Usp4P35123 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Gm29366-201ENSMUST00000190481 699 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.08□□□□□ -1.6
Usp4P35123 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm37523-201ENSMUST00000194901 412 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm43408-201ENSMUST00000198263 440 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm42459-201ENSMUST00000199679 742 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm42643-201ENSMUST00000200504 279 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Gm44149-201ENSMUST00000204256 226 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC5.08□□□□□ -1.6
Usp4P35123 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.08□□□□□ -1.6
Usp4P35123 Gm18194-201ENSMUST00000210455 481 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 Supt4b-201ENSMUST00000214434 351 ntBASIC5.08□□□□□ -1.6
Usp4P35123 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 Gm18703-201ENSMUST00000215318 333 ntBASIC5.08□□□□□ -1.6
Usp4P35123 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.08□□□□□ -1.6
Usp4P35123 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm22155-201ENSMUST00000083836 162 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm6177-201ENSMUST00000085589 465 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Usp4P35123 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Usp4P35123 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.08□□□□□ -1.6
Usp4P35123 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Usp4P35123 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.07□□□□□ -1.6
Usp4P35123 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.07□□□□□ -1.6
Usp4P35123 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
Usp4P35123 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.07□□□□□ -1.6
Usp4P35123 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.07□□□□□ -1.6
Usp4P35123 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.07□□□□□ -1.6
Usp4P35123 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Usp4P35123 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.07□□□□□ -1.6
Usp4P35123 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.07□□□□□ -1.6
Usp4P35123 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Usp4P35123 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
Usp4P35123 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.07□□□□□ -1.6
Usp4P35123 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Usp4P35123 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Usp4P35123 Gm22778-201ENSMUST00000104090 128 ntBASIC5.07□□□□□ -1.6
Usp4P35123 Gm24160-201ENSMUST00000104594 126 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms