Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm11367-201ENSMUST00000117802 120 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm12383-201ENSMUST00000120628 760 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm12466-201ENSMUST00000121199 620 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm14473-201ENSMUST00000122269 557 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.03□□□□□ -1.92
Sdc1P18828 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm22870-201ENSMUST00000157501 112 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm22501-201ENSMUST00000158981 127 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm27543-201ENSMUST00000183562 177 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Mir7037-201ENSMUST00000184414 65 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm27715-201ENSMUST00000184714 260 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm20811-201ENSMUST00000190500 553 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm2314-201ENSMUST00000200391 586 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm45380-201ENSMUST00000210465 315 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.03□□□□□ -1.92
Sdc1P18828 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Sdc1P18828 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Sdc1P18828 Gm23626-201ENSMUST00000082458 133 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Sdc1P18828 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Sdc1P18828 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Sdc1P18828 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
Sdc1P18828 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Sdc1P18828 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Sdc1P18828 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Sdc1P18828 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Sdc1P18828 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Mir1188-201ENSMUST00000116756 120 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm14880-201ENSMUST00000117581 292 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm12090-201ENSMUST00000118692 758 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm15195-201ENSMUST00000118775 263 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm14008-201ENSMUST00000120483 274 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm12578-201ENSMUST00000121244 417 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm14162-201ENSMUST00000121985 601 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm11575-201ENSMUST00000122243 228 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.02□□□□□ -1.93
Sdc1P18828 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.02□□□□□ -1.93
Sdc1P18828 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.02□□□□□ -1.93
Sdc1P18828 Gm22561-201ENSMUST00000157331 84 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm22516-201ENSMUST00000158266 124 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm23505-201ENSMUST00000158989 130 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.02□□□□□ -1.93
Sdc1P18828 Gm3454-201ENSMUST00000185571 412 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm18727-201ENSMUST00000185981 553 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm37684-201ENSMUST00000192779 355 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm17781-201ENSMUST00000195232 649 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm42593-201ENSMUST00000198469 377 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm44330-201ENSMUST00000200106 143 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm44076-201ENSMUST00000203072 520 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.02□□□□□ -1.93
Sdc1P18828 Gm9373-201ENSMUST00000208724 599 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm45316-201ENSMUST00000210128 162 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Sdc1P18828 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.02□□□□□ -1.93
Sdc1P18828 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm17829-201ENSMUST00000219782 344 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.02□□□□□ -1.93
Sdc1P18828 Gm6049-201ENSMUST00000222369 458 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.02□□□□□ -1.93
Sdc1P18828 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Sdc1P18828 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Sdc1P18828 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Sdc1P18828 Snord15b-201ENSMUST00000083032 145 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Sdc1P18828 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Sdc1P18828 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.02□□□□□ -1.93
Sdc1P18828 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Sdc1P18828 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.01□□□□□ -1.93
Sdc1P18828 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Sdc1P18828 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Sdc1P18828 Gm24578-201ENSMUST00000103970 129 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms