Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm43083-201ENSMUST00000199594 476 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Mir219c-201ENSMUST00000199860 60 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm44604-201ENSMUST00000205475 496 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm44523-201ENSMUST00000205616 417 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm19900-201ENSMUST00000207285 576 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm44858-201ENSMUST00000207360 154 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm45742-201ENSMUST00000212400 433 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm10709-201ENSMUST00000213318 480 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm18703-201ENSMUST00000215318 333 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm31849-201ENSMUST00000220306 375 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm9309-201ENSMUST00000223537 546 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 AV026068-231ENSMUST00000225862 482 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 AC123665.6-201ENSMUST00000228568 538 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Mir20a-201ENSMUST00000083508 107 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm6177-201ENSMUST00000085589 465 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd4P10628 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd4P10628 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd4P10628 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm12039-201ENSMUST00000118219 180 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm14521-201ENSMUST00000119545 350 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm24371-201ENSMUST00000122662 267 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm23902-201ENSMUST00000157571 134 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm26489-201ENSMUST00000157880 264 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm22085-201ENSMUST00000158344 110 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm23350-201ENSMUST00000158429 103 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm22529-201ENSMUST00000158817 123 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd4P10628 Mir7687-201ENSMUST00000184722 59 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd4P10628 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm43415-201ENSMUST00000201934 750 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm45614-201ENSMUST00000209994 721 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm45409-201ENSMUST00000211486 252 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC4.53□□□□□ -1.68
Hoxd4P10628 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 CT030170.4-202ENSMUST00000221109 540 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 AC124408.2-201ENSMUST00000228168 645 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm24316-201ENSMUST00000083041 107 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd4P10628 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd4P10628 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.53□□□□□ -1.68
Hoxd4P10628 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd4P10628 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.53□□□□□ -1.69
Hoxd4P10628 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.52□□□□□ -1.69
Hoxd4P10628 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd4P10628 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Hoxd4P10628 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.52□□□□□ -1.69
Hoxd4P10628 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms