Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm22599-201ENSMUST00000157597 132 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm24081-201ENSMUST00000175177 125 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm27545-201ENSMUST00000184755 202 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm28920-201ENSMUST00000189957 699 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Trbv11-201ENSMUST00000194354 260 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm36954-201ENSMUST00000195362 363 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm44382-201ENSMUST00000198683 122 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm44360-201ENSMUST00000200081 82 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm44817-201ENSMUST00000205416 453 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC4.71□□□□□ -1.66
Hoxd3P09027 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC4.71□□□□□ -1.66
Hoxd3P09027 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm2614-201ENSMUST00000223227 403 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxd3P09027 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxd3P09027 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxd3P09027 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm24041-201ENSMUST00000083115 156 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm23455-201ENSMUST00000083331 100 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxd3P09027 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm4994-201ENSMUST00000118379 2187 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm43864-201ENSMUST00000204452 4028 ntBASIC4.71□□□□□ -1.66
Hoxd3P09027 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.71□□□□□ -1.66
Hoxd3P09027 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxd3P09027 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxd3P09027 Gm38377-201ENSMUST00000193253 3772 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Hoxd3P09027 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hoxd3P09027 AC155298.1-201ENSMUST00000225350 3250 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxd3P09027 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm20486-201ENSMUST00000101544 128 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm12308-201ENSMUST00000120440 389 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm11852-201ENSMUST00000120806 222 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm14237-201ENSMUST00000122080 430 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 n-R5s201-201ENSMUST00000122622 116 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC4.7□□□□□ -1.66
Hoxd3P09027 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm22769-201ENSMUST00000158367 98 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm25520-201ENSMUST00000158389 118 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm23050-201ENSMUST00000158775 165 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm24085-201ENSMUST00000175172 116 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm26057-201ENSMUST00000178099 165 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Spin2g-201ENSMUST00000178425 687 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Mir6346-201ENSMUST00000183982 81 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm29031-201ENSMUST00000185316 614 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm29000-201ENSMUST00000185444 614 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm28204-201ENSMUST00000185934 614 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm28290-201ENSMUST00000186505 614 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm28161-201ENSMUST00000186669 614 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm7266-201ENSMUST00000187999 405 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm28749-209ENSMUST00000189599 614 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm29657-201ENSMUST00000189807 342 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm33163-201ENSMUST00000194504 614 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm2040-201ENSMUST00000202979 289 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm45236-201ENSMUST00000208632 229 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 AC156037.1-201ENSMUST00000221133 127 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 AC125543.3-201ENSMUST00000221991 126 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm18618-201ENSMUST00000222211 473 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hoxd3P09027 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm44068-201ENSMUST00000204049 2128 ntBASIC4.7□□□□□ -1.66
Hoxd3P09027 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hoxd3P09027 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxd3P09027 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxd3P09027 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxd3P09027 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Hoxd3P09027 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC4.7□□□□□ -1.66
Hoxd3P09027 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hoxd3P09027 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hoxd3P09027 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hoxd3P09027 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hoxd3P09027 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hoxd3P09027 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hoxd3P09027 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hoxd3P09027 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hoxd3P09027 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hoxd3P09027 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hoxd3P09027 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC4.69□□□□□ -1.66
Hoxd3P09027 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hoxd3P09027 Gm11633-201ENSMUST00000118176 444 ntBASIC4.69□□□□□ -1.66
Hoxd3P09027 Gm11398-201ENSMUST00000120330 320 ntBASIC4.69□□□□□ -1.66
Hoxd3P09027 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms