Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC154552.5-201ENSMUST00000222352 207 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC4.38□□□□□ -1.71
Col3a1P08121 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col3a1P08121 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col3a1P08121 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm22575-201ENSMUST00000082981 110 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm9314-201ENSMUST00000199881 1528 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col3a1P08121 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm25773-201ENSMUST00000116718 127 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm12587-201ENSMUST00000120180 427 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm11387-201ENSMUST00000120266 772 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col3a1P08121 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm27592-201ENSMUST00000157729 126 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm16588-201ENSMUST00000162889 355 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm22174-201ENSMUST00000175050 125 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm22692-201ENSMUST00000175055 125 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm27634-201ENSMUST00000175060 126 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm26460-201ENSMUST00000175061 126 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm22460-201ENSMUST00000175269 124 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm24365-201ENSMUST00000175384 125 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm44310-201ENSMUST00000175424 126 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm22639-201ENSMUST00000175591 125 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm24979-201ENSMUST00000178626 126 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm27743-201ENSMUST00000185136 126 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm3496-201ENSMUST00000188283 745 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm44600-201ENSMUST00000208540 111 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.37□□□□□ -1.71
Col3a1P08121 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col3a1P08121 AC139845.2-201ENSMUST00000227504 436 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm25586-201ENSMUST00000082499 112 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col3a1P08121 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col3a1P08121 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm11923-201ENSMUST00000118135 508 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm15377-201ENSMUST00000119594 246 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm24498-201ENSMUST00000158445 102 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm3454-201ENSMUST00000185571 412 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm29492-201ENSMUST00000187124 457 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC4.37□□□□□ -1.71
Col3a1P08121 Gm18611-201ENSMUST00000200334 1118 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm36776-201ENSMUST00000207006 203 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm18645-201ENSMUST00000209593 651 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Gm45246-201ENSMUST00000210820 367 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Col3a1P08121 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.37□□□□□ -1.71
Col3a1P08121 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 AC126275.1-201ENSMUST00000224881 446 ntBASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col3a1P08121 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Col3a1P08121 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Col3a1P08121 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
Col3a1P08121 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Col3a1P08121 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Col3a1P08121 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col3a1P08121 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col3a1P08121 Gm9157-201ENSMUST00000117673 225 ntBASIC4.36□□□□□ -1.71
Col3a1P08121 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms