Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col5a1O88207 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col5a1O88207 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm12387-201ENSMUST00000118573 955 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm19104-201ENSMUST00000198392 679 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Col5a1O88207 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col5a1O88207 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Col5a1O88207 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm14901-201ENSMUST00000119001 283 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm8988-201ENSMUST00000155015 1240 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm26041-201ENSMUST00000158148 108 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm17159-201ENSMUST00000169043 482 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 Mir6398-201ENSMUST00000184541 102 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm28594-201ENSMUST00000187022 661 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm19086-201ENSMUST00000190772 665 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm45317-201ENSMUST00000210385 223 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 AC172027.1-201ENSMUST00000217659 337 ntBASIC3.04□□□□□ -1.92
Col5a1O88207 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Col5a1O88207 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Col5a1O88207 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col5a1O88207 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.03□□□□□ -1.92
Col5a1O88207 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Col5a1O88207 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col5a1O88207 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col5a1O88207 Gm25485-201ENSMUST00000104120 132 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.03□□□□□ -1.92
Col5a1O88207 Gm21999-201ENSMUST00000165985 387 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Gm20656-201ENSMUST00000176925 518 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Gm27538-201ENSMUST00000185065 294 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Gm29259-201ENSMUST00000186396 694 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Gm43124-201ENSMUST00000201878 278 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Gm20946-201ENSMUST00000212367 461 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.03□□□□□ -1.92
Col5a1O88207 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.03□□□□□ -1.92
Col5a1O88207 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col5a1O88207 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Col5a1O88207 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col5a1O88207 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col5a1O88207 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col5a1O88207 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Col5a1O88207 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col5a1O88207 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col5a1O88207 Gm24958-201ENSMUST00000158009 97 ntBASIC3.03□□□□□ -1.93
Col5a1O88207 Gm23824-201ENSMUST00000158741 276 ntBASIC3.03□□□□□ -1.93
Col5a1O88207 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.03□□□□□ -1.93
Col5a1O88207 Gm28614-201ENSMUST00000186483 458 ntBASIC3.03□□□□□ -1.93
Col5a1O88207 Gm18445-201ENSMUST00000195502 774 ntBASIC3.03□□□□□ -1.93
Col5a1O88207 Gm45269-201ENSMUST00000210359 282 ntBASIC3.03□□□□□ -1.93
Col5a1O88207 Gm6842-201ENSMUST00000211361 390 ntBASIC3.03□□□□□ -1.93
Col5a1O88207 CT025552.1-201ENSMUST00000224561 521 ntBASIC3.03□□□□□ -1.93
Col5a1O88207 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Col5a1O88207 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.93
Col5a1O88207 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col5a1O88207 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col5a1O88207 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col5a1O88207 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col5a1O88207 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col5a1O88207 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms