Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm26121-201ENSMUST00000083364 162 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cacna1bO55017 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cacna1bO55017 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm37911-201ENSMUST00000193099 1545 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm42593-201ENSMUST00000198469 377 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm46138-201ENSMUST00000215294 426 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 AC153936.1-201ENSMUST00000219874 395 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.02□□□□□ -1.93
Cacna1bO55017 AC154618.1-201ENSMUST00000227451 303 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cacna1bO55017 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Cacna1bO55017 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Cacna1bO55017 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Cacna1bO55017 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cacna1bO55017 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm11881-201ENSMUST00000119408 572 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm11321-201ENSMUST00000121257 902 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm44712-201ENSMUST00000206250 1076 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm19126-201ENSMUST00000207896 509 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm22970-201ENSMUST00000083304 186 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cacna1bO55017 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cacna1bO55017 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cacna1bO55017 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cacna1bO55017 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.01□□□□□ -1.93
Cacna1bO55017 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm19694-201ENSMUST00000192364 505 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm18843-201ENSMUST00000194982 719 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm17967-201ENSMUST00000195319 647 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.01□□□□□ -1.93
Cacna1bO55017 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cacna1bO55017 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cacna1bO55017 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Cacna1bO55017 Gm37176-201ENSMUST00000193300 4051 ntBASIC3□□□□□ -1.93
Cacna1bO55017 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cacna1bO55017 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3□□□□□ -1.93
Cacna1bO55017 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cacna1bO55017 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3□□□□□ -1.93
Cacna1bO55017 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cacna1bO55017 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
Cacna1bO55017 Gm29668-201ENSMUST00000187802 315 ntBASIC3□□□□□ -1.93
Cacna1bO55017 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3□□□□□ -1.93
Cacna1bO55017 Gm28877-201ENSMUST00000191349 604 ntBASIC3□□□□□ -1.93
Cacna1bO55017 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
Cacna1bO55017 Gm45427-201ENSMUST00000209572 1253 ntBASIC3□□□□□ -1.93
Cacna1bO55017 AC174457.1-201ENSMUST00000215932 226 ntBASIC3□□□□□ -1.93
Cacna1bO55017 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3□□□□□ -1.93
Cacna1bO55017 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3□□□□□ -1.93
Cacna1bO55017 AC140393.2-201ENSMUST00000226894 943 ntBASIC3□□□□□ -1.93
Cacna1bO55017 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3□□□□□ -1.93
Cacna1bO55017 Gm37674-201ENSMUST00000194177 1834 ntBASIC3□□□□□ -1.93
Cacna1bO55017 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm23911-201ENSMUST00000104596 134 ntBASIC2.99□□□□□ -1.93
Cacna1bO55017 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm12222-201ENSMUST00000121368 260 ntBASIC2.99□□□□□ -1.93
Cacna1bO55017 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.99□□□□□ -1.93
Cacna1bO55017 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Cacna1bO55017 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm44519-201ENSMUST00000206486 122 ntBASIC2.99□□□□□ -1.93
Cacna1bO55017 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.99□□□□□ -1.93
Cacna1bO55017 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm7470-201ENSMUST00000194219 2095 ntBASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm12667-201ENSMUST00000118299 1332 ntBASIC2.99□□□□□ -1.93
Cacna1bO55017 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm22532-201ENSMUST00000158822 140 ntBASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm43992-201ENSMUST00000204358 197 ntBASIC2.99□□□□□ -1.93
Cacna1bO55017 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Cacna1bO55017 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Cacna1bO55017 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Cacna1bO55017 Gm20651-201ENSMUST00000177219 329 ntBASIC2.98□□□□□ -1.93
Cacna1bO55017 Zfp-ps-201ENSMUST00000185025 478 ntBASIC2.98□□□□□ -1.93
Cacna1bO55017 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC2.98□□□□□ -1.93
Cacna1bO55017 Gm43491-201ENSMUST00000197133 784 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms