Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm27887-201ENSMUST00000184367 102 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm27190-201ENSMUST00000184890 542 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm28353-201ENSMUST00000186482 570 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm28533-201ENSMUST00000186741 570 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm38131-201ENSMUST00000192449 430 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm43043-201ENSMUST00000196579 412 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm42694-201ENSMUST00000196951 358 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm5322-201ENSMUST00000206142 699 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm31849-201ENSMUST00000220306 375 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 AC134254.2-201ENSMUST00000221262 170 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 AC107711.2-203ENSMUST00000227827 762 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm23302-201ENSMUST00000082710 100 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm23679-201ENSMUST00000083161 119 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm11737-201ENSMUST00000118713 468 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm9428-201ENSMUST00000127214 769 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm25152-201ENSMUST00000157117 114 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm23662-201ENSMUST00000158046 111 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm26404-201ENSMUST00000158498 109 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Mir7020-201ENSMUST00000183787 70 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Mir7235-201ENSMUST00000183796 56 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Mir7211-201ENSMUST00000184071 63 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm28061-201ENSMUST00000189085 807 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm28506-201ENSMUST00000189937 150 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm29475-201ENSMUST00000190767 312 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm44348-201ENSMUST00000200165 122 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm45438-201ENSMUST00000210242 564 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm7822-201ENSMUST00000222433 581 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Gm25579-201ENSMUST00000083407 106 ntBASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Pcdh1F7BJK1 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.63□□□□□ -1.67
Pcdh1F7BJK1 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms