Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Gm15180-201ENSMUST00000117745 492 ntBASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm12954-201ENSMUST00000118610 611 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm12118-201ENSMUST00000119766 532 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm17030-201ENSMUST00000167016 393 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm38166-201ENSMUST00000191660 471 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm44623-201ENSMUST00000207934 434 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm25421-201ENSMUST00000104218 164 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm7974-201ENSMUST00000117154 408 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a3E9PWQ3 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm16445-201ENSMUST00000120399 714 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm15536-201ENSMUST00000121411 114 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm16274-201ENSMUST00000139251 592 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm9890-201ENSMUST00000171867 537 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm28030-201ENSMUST00000184987 138 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.13□□□□□ -1.91
Col6a3E9PWQ3 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm24082-201ENSMUST00000175175 83 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm27369-201ENSMUST00000185182 71 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm43512-201ENSMUST00000198495 176 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm7368-201ENSMUST00000213307 367 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 AC127371.1-201ENSMUST00000228516 312 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm24067-201ENSMUST00000104514 85 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm13438-201ENSMUST00000120100 573 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm22730-201ENSMUST00000158085 171 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm27220-201ENSMUST00000183453 262 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm43440-201ENSMUST00000201957 729 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm7422-201ENSMUST00000220115 640 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Gm38020-201ENSMUST00000193066 4676 ntBASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col6a3E9PWQ3 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm11344-201ENSMUST00000122011 335 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm21112-201ENSMUST00000212224 578 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm7760-201ENSMUST00000212265 578 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm24889-201ENSMUST00000104388 132 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm25044-201ENSMUST00000158603 104 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Gm45200-201ENSMUST00000207434 919 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.11□□□□□ -1.91
Col6a3E9PWQ3 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms