Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm22532-201ENSMUST00000158822 140 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm43925-201ENSMUST00000203498 206 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm23175-201ENSMUST00000104371 132 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm26477-201ENSMUST00000122617 323 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm18486-201ENSMUST00000184040 298 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm37676-201ENSMUST00000195496 507 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm43217-201ENSMUST00000199513 367 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm19039-201ENSMUST00000204363 575 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm26129-201ENSMUST00000082719 107 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Snord14e-201ENSMUST00000082857 90 ntBASIC3.36□□□□□ -1.87
Scn1aA2APX8 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn1aA2APX8 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.35□□□□□ -1.87
Scn1aA2APX8 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Gm8423-201ENSMUST00000211387 607 ntBASIC3.35□□□□□ -1.87
Scn1aA2APX8 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.35□□□□□ -1.87
Scn1aA2APX8 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.35□□□□□ -1.87
Scn1aA2APX8 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Scn1aA2APX8 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn1aA2APX8 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.35□□□□□ -1.87
Scn1aA2APX8 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.35□□□□□ -1.87
Scn1aA2APX8 Gm25308-201ENSMUST00000104171 158 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm11260-201ENSMUST00000121163 942 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm25806-201ENSMUST00000122782 122 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm6245-201ENSMUST00000164699 768 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm18520-201ENSMUST00000174783 658 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm23633-201ENSMUST00000175293 119 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.34□□□□□ -1.87
Scn1aA2APX8 Mir8096-201ENSMUST00000184526 127 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm32340-201ENSMUST00000192883 259 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm35876-201ENSMUST00000205044 459 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm20074-201ENSMUST00000208144 484 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm45317-201ENSMUST00000210385 223 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Scn1aA2APX8 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.34□□□□□ -1.87
Scn1aA2APX8 Gm14987-201ENSMUST00000117820 676 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm12739-201ENSMUST00000119769 382 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm11229-201ENSMUST00000121993 437 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm13487-201ENSMUST00000122240 864 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm26991-201ENSMUST00000180950 620 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm28002-201ENSMUST00000184832 100 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm28974-201ENSMUST00000187893 231 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm28113-201ENSMUST00000188280 229 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm43825-201ENSMUST00000199650 734 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm7948-201ENSMUST00000212607 844 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.34□□□□□ -1.88
Scn1aA2APX8 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.34□□□□□ -1.88
Scn1aA2APX8 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Scn1aA2APX8 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.34□□□□□ -1.88
Scn1aA2APX8 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Scn1aA2APX8 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Scn1aA2APX8 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Scn1aA2APX8 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.33□□□□□ -1.88
Scn1aA2APX8 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn1aA2APX8 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.33□□□□□ -1.88
Scn1aA2APX8 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Scn1aA2APX8 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.33□□□□□ -1.88
Scn1aA2APX8 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Scn1aA2APX8 Gm24831-201ENSMUST00000116778 126 ntBASIC3.33□□□□□ -1.88
Scn1aA2APX8 Gm7855-201ENSMUST00000137737 687 ntBASIC3.33□□□□□ -1.88
Scn1aA2APX8 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Scn1aA2APX8 Gm36638-201ENSMUST00000193295 400 ntBASIC3.33□□□□□ -1.88
Scn1aA2APX8 Gm18747-201ENSMUST00000198129 648 ntBASIC3.33□□□□□ -1.88
Scn1aA2APX8 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms