Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm19620-201ENSMUST00000195972 434 ntBASIC1.84□□□□□ -2.11
Ubr4A2AN08 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 AC164424.1-201ENSMUST00000221690 170 ntBASIC1.84□□□□□ -2.11
Ubr4A2AN08 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.84□□□□□ -2.11
Ubr4A2AN08 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Gm24317-201ENSMUST00000178536 107 ntBASIC1.84□□□□□ -2.11
Ubr4A2AN08 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.84□□□□□ -2.11
Ubr4A2AN08 Gm6303-201ENSMUST00000210123 471 ntBASIC1.84□□□□□ -2.11
Ubr4A2AN08 Gm17820-201ENSMUST00000220213 1068 ntBASIC1.84□□□□□ -2.11
Ubr4A2AN08 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ubr4A2AN08 AC158805.1-201ENSMUST00000218197 2631 ntBASIC1.84□□□□□ -2.11
Ubr4A2AN08 Gm37124-201ENSMUST00000192140 1992 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Dnm3os-201ENSMUST00000139662 7928 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm11913-201ENSMUST00000119094 336 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm12495-201ENSMUST00000119750 447 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm42621-201ENSMUST00000198114 275 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm37965-201ENSMUST00000195304 1362 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm11746-201ENSMUST00000119843 821 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm12978-201ENSMUST00000121250 522 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm14581-201ENSMUST00000121726 198 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm18448-201ENSMUST00000186286 599 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ubr4A2AN08 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC1.84□□□□□ -2.12
Ubr4A2AN08 Gm37244-201ENSMUST00000191748 1981 ntBASIC1.84□□□□□ -2.12
Ubr4A2AN08 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ubr4A2AN08 AC192616.2-201ENSMUST00000221482 3841 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm23746-201ENSMUST00000104229 125 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm9890-201ENSMUST00000171867 537 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm27245-201ENSMUST00000184385 376 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm43751-201ENSMUST00000200275 3071 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm13607-201ENSMUST00000117875 539 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm12432-201ENSMUST00000119540 186 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Mir3968-201ENSMUST00000175355 100 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm37455-201ENSMUST00000191993 529 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm37659-201ENSMUST00000194574 111 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm42850-201ENSMUST00000202094 201 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm10025-201ENSMUST00000079568 372 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Mir322-201ENSMUST00000083484 95 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm37320-201ENSMUST00000192781 4953 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm24342-201ENSMUST00000103907 104 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm15421-202ENSMUST00000118224 399 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm15034-201ENSMUST00000120043 349 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm22988-201ENSMUST00000122759 144 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm25846-201ENSMUST00000158013 135 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ubr4A2AN08 Gm29588-201ENSMUST00000185738 298 ntBASIC1.83□□□□□ -2.12
Ubr4A2AN08 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ubr4A2AN08 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms