Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Gm6056-201ENSMUST00000221253 488 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Snora52-201ENSMUST00000082732 137 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Gm22810-201ENSMUST00000082741 158 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Mir188-201ENSMUST00000083464 68 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
H2afb3S4R1G7 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.14□□□□□ -1.75
H2afb3S4R1G7 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm7429-201ENSMUST00000118664 348 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm12878-201ENSMUST00000118744 332 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm14835-201ENSMUST00000119039 315 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm23465-201ENSMUST00000157134 262 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm24774-201ENSMUST00000157384 134 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm22084-201ENSMUST00000157585 105 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm15946-201ENSMUST00000160654 423 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm4222-201ENSMUST00000165784 470 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm4617-201ENSMUST00000178993 331 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm24897-201ENSMUST00000179033 107 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm5527-201ENSMUST00000179821 642 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm28830-201ENSMUST00000188192 213 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm29038-201ENSMUST00000191543 678 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm8939-201ENSMUST00000192577 964 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm38329-201ENSMUST00000193473 427 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm43945-201ENSMUST00000203595 754 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 AC131720.2-201ENSMUST00000220420 431 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.13□□□□□ -1.75
H2afb3S4R1G7 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Gm14415-201ENSMUST00000118260 1578 ntBASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Gm23424-201ENSMUST00000103889 110 ntBASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Gm14107-201ENSMUST00000117774 330 ntBASIC4.12□□□□□ -1.75
H2afb3S4R1G7 Gm2318-201ENSMUST00000119623 639 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms