Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm24173-201ENSMUST00000104130 128 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm23319-201ENSMUST00000104467 131 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm15244-201ENSMUST00000121122 130 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm12778-201ENSMUST00000122341 333 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm25962-201ENSMUST00000157173 168 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm23232-201ENSMUST00000157300 105 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm23756-201ENSMUST00000157582 114 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm22113-201ENSMUST00000158343 104 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm17119-201ENSMUST00000163943 280 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm21839-201ENSMUST00000179536 378 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm26701-201ENSMUST00000181571 234 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Mir6367-201ENSMUST00000183385 102 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm2367-201ENSMUST00000192374 472 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm18007-201ENSMUST00000205019 844 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm44881-201ENSMUST00000205425 367 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm9685-201ENSMUST00000211275 538 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm45778-201ENSMUST00000211959 153 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm7780-201ENSMUST00000214787 406 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm18413-201ENSMUST00000221573 655 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm18618-201ENSMUST00000222211 473 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm9267-201ENSMUST00000222831 404 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Snord14e-201ENSMUST00000082857 90 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh5Q9QUM7 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm13714-201ENSMUST00000117313 221 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm14142-201ENSMUST00000117833 296 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm6884-201ENSMUST00000119318 615 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm11931-201ENSMUST00000121630 447 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm4912-201ENSMUST00000122212 1044 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm25985-201ENSMUST00000122677 107 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm22767-201ENSMUST00000158365 165 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm25655-201ENSMUST00000158465 290 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Mir6540-201ENSMUST00000184886 108 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm27804-201ENSMUST00000185135 119 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm42799-201ENSMUST00000201331 328 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm7808-201ENSMUST00000082002 387 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Mir425-201ENSMUST00000083645 85 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm22576-201ENSMUST00000083733 104 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Mir452-201ENSMUST00000093629 85 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gm42484-201ENSMUST00000196075 2104 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.53□□□□□ -1.36
Msh5Q9QUM7 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
Msh5Q9QUM7 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Mir711-201ENSMUST00000102188 82 ntBASIC6.52□□□□□ -1.37
Msh5Q9QUM7 Mir701-201ENSMUST00000102208 109 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms