Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Gm37617-201ENSMUST00000194309 159 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Gm34779-201ENSMUST00000210036 263 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Gm34005-201ENSMUST00000215834 282 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Gm7119-201ENSMUST00000221345 695 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Gm25480-201ENSMUST00000083217 133 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Upk3aQ9JKX8 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm11233-201ENSMUST00000122357 634 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm23602-201ENSMUST00000157258 132 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm22310-201ENSMUST00000157509 116 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm26045-201ENSMUST00000157862 97 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm22840-201ENSMUST00000158444 136 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Snord92-201ENSMUST00000175548 85 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm3454-201ENSMUST00000185571 412 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm29105-201ENSMUST00000187256 450 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm6680-201ENSMUST00000192789 950 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Trbv8-201ENSMUST00000194020 285 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm17967-201ENSMUST00000195319 647 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm43345-201ENSMUST00000199484 269 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm7041-201ENSMUST00000201227 524 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm25592-201ENSMUST00000082635 131 ntBASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Upk3aQ9JKX8 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm12578-201ENSMUST00000121244 417 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm25105-201ENSMUST00000122477 130 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm25292-201ENSMUST00000122797 322 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm22036-201ENSMUST00000157279 215 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm23540-201ENSMUST00000157543 164 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm26487-201ENSMUST00000158022 94 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm23666-201ENSMUST00000158053 116 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm19418-201ENSMUST00000197436 580 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm18540-201ENSMUST00000204025 526 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm3189-201ENSMUST00000205595 832 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 Gm45317-201ENSMUST00000210385 223 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.48□□□□□ -1.85
Upk3aQ9JKX8 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms