Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim39Q9ESN2 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.29□□□□□ -1.56
Trim39Q9ESN2 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim39Q9ESN2 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim39Q9ESN2 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim39Q9ESN2 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim39Q9ESN2 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm22374-201ENSMUST00000104583 132 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm15195-201ENSMUST00000118775 263 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm11313-201ENSMUST00000118779 432 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm23463-201ENSMUST00000122468 99 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm22345-201ENSMUST00000122644 107 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm22718-201ENSMUST00000122701 315 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Mir1945-201ENSMUST00000157919 78 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm15970-201ENSMUST00000160623 834 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm9830-201ENSMUST00000178509 357 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm21673-201ENSMUST00000186640 436 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm29147-201ENSMUST00000186846 315 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm5058-201ENSMUST00000187331 463 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm21135-201ENSMUST00000189023 436 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm28160-201ENSMUST00000191229 315 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm42458-201ENSMUST00000201914 369 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm8745-201ENSMUST00000207846 782 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm18442-201ENSMUST00000220925 639 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm18592-201ENSMUST00000221529 276 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm2710-201ENSMUST00000073196 603 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm10237-201ENSMUST00000078393 273 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm24029-201ENSMUST00000083928 143 ntBASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim39Q9ESN2 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm23739-201ENSMUST00000102295 108 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm14622-201ENSMUST00000117117 468 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm25826-201ENSMUST00000157090 137 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm25341-201ENSMUST00000157461 268 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm23896-201ENSMUST00000158109 130 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm23704-201ENSMUST00000158844 340 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm18343-201ENSMUST00000172802 604 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm20545-201ENSMUST00000174739 210 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm36954-201ENSMUST00000195362 363 ntBASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.27□□□□□ -1.57
Trim39Q9ESN2 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms