Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm24371-201ENSMUST00000122662 267 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm26373-201ENSMUST00000157833 103 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm16290-201ENSMUST00000161175 474 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm6673-201ENSMUST00000166114 700 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm22859-201ENSMUST00000174978 122 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm28976-201ENSMUST00000188070 144 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm19029-201ENSMUST00000189923 564 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm2053-201ENSMUST00000195671 631 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm2142-201ENSMUST00000197899 589 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm4963-201ENSMUST00000072718 378 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RpainQ9CWY9 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.16□□□□□ -1.58
RpainQ9CWY9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.16□□□□□ -1.58
RpainQ9CWY9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RpainQ9CWY9 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.15□□□□□ -1.58
RpainQ9CWY9 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RpainQ9CWY9 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.15□□□□□ -1.58
RpainQ9CWY9 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RpainQ9CWY9 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RpainQ9CWY9 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.15□□□□□ -1.58
RpainQ9CWY9 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RpainQ9CWY9 Gm28362-201ENSMUST00000189430 2420 ntBASIC5.15□□□□□ -1.58
RpainQ9CWY9 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RpainQ9CWY9 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RpainQ9CWY9 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RpainQ9CWY9 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.15□□□□□ -1.58
RpainQ9CWY9 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm11912-201ENSMUST00000117235 264 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm14909-201ENSMUST00000117853 351 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm12803-201ENSMUST00000118907 821 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm14927-201ENSMUST00000120283 454 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm13745-201ENSMUST00000121994 527 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm22479-201ENSMUST00000122566 81 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm6058-201ENSMUST00000154261 399 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm7094-201ENSMUST00000178379 366 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm27688-201ENSMUST00000183634 91 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Mir6541-201ENSMUST00000183649 110 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm43669-201ENSMUST00000198229 436 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm44055-201ENSMUST00000204376 247 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm44776-201ENSMUST00000207212 381 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm20304-201ENSMUST00000218168 444 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm23093-201ENSMUST00000083450 102 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Mir20a-201ENSMUST00000083508 107 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.15□□□□□ -1.59
RpainQ9CWY9 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RpainQ9CWY9 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RpainQ9CWY9 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.14□□□□□ -1.59
RpainQ9CWY9 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RpainQ9CWY9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RpainQ9CWY9 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.14□□□□□ -1.59
RpainQ9CWY9 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RpainQ9CWY9 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RpainQ9CWY9 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms