Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm2314-201ENSMUST00000200391 586 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm42758-201ENSMUST00000202146 283 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm44871-201ENSMUST00000207821 497 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm45247-201ENSMUST00000210757 309 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm9818-201ENSMUST00000050900 255 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm7099-201ENSMUST00000080066 554 ntBASIC3.47□□□□□ -1.85
Use1Q9CQ56 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Use1Q9CQ56 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.46□□□□□ -1.85
Use1Q9CQ56 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.46□□□□□ -1.85
Use1Q9CQ56 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Use1Q9CQ56 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm14142-201ENSMUST00000117833 296 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm14570-201ENSMUST00000119444 391 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm11830-201ENSMUST00000120175 561 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm11982-201ENSMUST00000121480 314 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm23792-201ENSMUST00000122557 93 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Use1Q9CQ56 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm24059-201ENSMUST00000157493 312 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm22211-201ENSMUST00000158097 156 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm22395-201ENSMUST00000177427 96 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm27308-201ENSMUST00000184807 233 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm6947-201ENSMUST00000186254 78 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm35857-201ENSMUST00000212739 178 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Use1Q9CQ56 Gm336-201ENSMUST00000186376 1480 ntBASIC3.46□□□□□ -1.86
Use1Q9CQ56 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm15480-201ENSMUST00000120442 519 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm24537-201ENSMUST00000157950 102 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm22889-201ENSMUST00000158639 58 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm24734-201ENSMUST00000158860 262 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm27611-201ENSMUST00000184690 108 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm37698-201ENSMUST00000192605 463 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm44099-201ENSMUST00000203299 112 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm18602-201ENSMUST00000209794 851 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm22444-201ENSMUST00000093693 108 ntBASIC3.45□□□□□ -1.86
Use1Q9CQ56 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Use1Q9CQ56 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Use1Q9CQ56 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.44□□□□□ -1.86
Use1Q9CQ56 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.44□□□□□ -1.86
Use1Q9CQ56 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.44□□□□□ -1.86
Use1Q9CQ56 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.44□□□□□ -1.86
Use1Q9CQ56 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Use1Q9CQ56 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms