Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm14142-201ENSMUST00000117833 296 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm14577-201ENSMUST00000121134 256 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm13602-201ENSMUST00000122405 493 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm24402-201ENSMUST00000157873 91 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm25923-201ENSMUST00000158312 138 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm7438-201ENSMUST00000177664 639 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm7408-201ENSMUST00000178014 639 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm7386-201ENSMUST00000178020 639 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm3657-201ENSMUST00000178170 639 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm7415-201ENSMUST00000178205 639 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm7391-201ENSMUST00000178680 639 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm19427-201ENSMUST00000183619 208 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm37881-201ENSMUST00000193001 421 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm29793-201ENSMUST00000202874 460 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm45007-201ENSMUST00000206237 366 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm3690-201ENSMUST00000211341 262 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 CT025526.1-201ENSMUST00000217327 267 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm24031-201ENSMUST00000083930 131 ntBASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ushbp1Q8R370 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm13321-201ENSMUST00000117101 400 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm12062-201ENSMUST00000117533 259 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm15443-201ENSMUST00000118947 820 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm9308-201ENSMUST00000119073 448 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm5391-201ENSMUST00000121155 613 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm23496-201ENSMUST00000157741 248 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm24939-201ENSMUST00000158325 137 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm20885-201ENSMUST00000190192 654 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm38150-201ENSMUST00000192996 452 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm29740-201ENSMUST00000193182 655 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm36866-201ENSMUST00000193343 657 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm36047-201ENSMUST00000193659 657 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm20857-201ENSMUST00000194766 657 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm20858-201ENSMUST00000195459 657 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm43370-201ENSMUST00000196437 284 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm42438-201ENSMUST00000197832 974 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm8069-201ENSMUST00000197887 154 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm42818-201ENSMUST00000198869 987 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm43214-201ENSMUST00000199242 352 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm43224-201ENSMUST00000201567 898 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 AC156560.1-201ENSMUST00000221425 256 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ushbp1Q8R370 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm22473-201ENSMUST00000104114 132 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm23594-201ENSMUST00000104307 134 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm15916-201ENSMUST00000118355 736 ntBASIC5.12□□□□□ -1.59
Ushbp1Q8R370 Gm12016-201ENSMUST00000119079 681 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms