Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm14050-201ENSMUST00000117052 346 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm14299-201ENSMUST00000117586 397 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm2892-201ENSMUST00000145537 711 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm26148-201ENSMUST00000157430 68 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm26001-201ENSMUST00000157989 103 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm23317-201ENSMUST00000157999 129 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm23198-201ENSMUST00000158811 91 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm2862-201ENSMUST00000161524 328 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm17655-201ENSMUST00000167969 255 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm27964-201ENSMUST00000185195 62 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm38098-201ENSMUST00000194115 241 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm43897-201ENSMUST00000204019 309 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm9375-201ENSMUST00000208899 903 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm17829-201ENSMUST00000219782 344 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rpp40Q8R1F9 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm7739-201ENSMUST00000221131 1560 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm11692-201ENSMUST00000122121 902 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm23773-201ENSMUST00000158985 296 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm25944-201ENSMUST00000178758 94 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm5473-201ENSMUST00000179326 642 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm44099-201ENSMUST00000203299 112 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm46234-201ENSMUST00000218702 259 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 AC167669.3-201ENSMUST00000224720 393 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 AC150560.3-201ENSMUST00000227442 455 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 AC137902.2-201ENSMUST00000227989 576 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm10704-201ENSMUST00000098952 730 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Gm20679-201ENSMUST00000177285 1402 ntBASIC4.27□□□□□ -1.73
Rpp40Q8R1F9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Gm10552-201ENSMUST00000113396 372 ntBASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Gm11448-201ENSMUST00000120427 450 ntBASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Rpp40Q8R1F9 Gm24241-201ENSMUST00000157787 145 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms