Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm14050-201ENSMUST00000117052 346 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm15382-201ENSMUST00000118011 537 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm12433-201ENSMUST00000119659 255 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm12045-201ENSMUST00000122122 573 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm11506-201ENSMUST00000122414 470 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm18588-201ENSMUST00000177308 492 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm22243-201ENSMUST00000178754 120 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm21991-201ENSMUST00000180006 508 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm27342-201ENSMUST00000183530 109 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm27538-201ENSMUST00000185065 294 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm28597-201ENSMUST00000187664 666 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm28211-201ENSMUST00000190920 315 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm38053-201ENSMUST00000193938 160 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm43304-201ENSMUST00000196803 326 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm44817-201ENSMUST00000205416 453 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm45392-201ENSMUST00000210441 214 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 AC124399.1-201ENSMUST00000218334 590 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 AC156790.3-201ENSMUST00000226200 254 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Mir421-201ENSMUST00000083575 76 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Vps53Q8CCB4 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 AC140397.1-201ENSMUST00000225563 4562 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Mir105-201ENSMUST00000104655 80 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm12814-201ENSMUST00000117091 846 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm14981-201ENSMUST00000117325 943 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm13386-201ENSMUST00000117677 124 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm15058-201ENSMUST00000117689 458 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm12102-201ENSMUST00000118251 604 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm14303-201ENSMUST00000121320 171 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm23212-201ENSMUST00000122718 60 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm24939-201ENSMUST00000158325 137 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm25264-201ENSMUST00000158519 117 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm23179-201ENSMUST00000158693 304 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm23186-201ENSMUST00000180078 107 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm11392-201ENSMUST00000181419 710 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm29550-201ENSMUST00000185543 285 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm37501-201ENSMUST00000192830 691 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm43884-201ENSMUST00000204251 559 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Vps53Q8CCB4 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm12571-201ENSMUST00000118132 243 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm14887-201ENSMUST00000119522 663 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm11625-201ENSMUST00000119535 296 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm22204-201ENSMUST00000122654 327 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Gm22084-201ENSMUST00000157585 105 ntBASIC5.06□□□□□ -1.6
Vps53Q8CCB4 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms