Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm38040-201ENSMUST00000193505 225 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm37681-201ENSMUST00000193880 727 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm19177-201ENSMUST00000204520 613 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm9068-201ENSMUST00000217393 455 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 AC125531.1-201ENSMUST00000219849 221 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm8288-201ENSMUST00000223406 593 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim47Q8C0E3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm14874-201ENSMUST00000118995 438 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm14472-201ENSMUST00000119815 282 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm13007-201ENSMUST00000121866 365 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Trav20-201ENSMUST00000142754 347 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm25333-201ENSMUST00000158035 246 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm22411-201ENSMUST00000175462 126 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm22002-201ENSMUST00000175622 125 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm22290-201ENSMUST00000177655 107 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm22583-201ENSMUST00000178031 107 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Mir7006-201ENSMUST00000183624 69 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Mir6539-201ENSMUST00000183732 110 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm37338-201ENSMUST00000191986 127 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm42925-201ENSMUST00000197359 285 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm42828-201ENSMUST00000199669 469 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm35648-201ENSMUST00000202304 475 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 AC133598.3-201ENSMUST00000224322 568 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 AC139750.2-201ENSMUST00000224424 386 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 AC137961.1-201ENSMUST00000227924 734 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.13□□□□□ -1.43
Trim47Q8C0E3 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Trim47Q8C0E3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm42729-201ENSMUST00000201770 2930 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm14287-201ENSMUST00000121060 117 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm25106-201ENSMUST00000122672 134 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm6872-201ENSMUST00000165001 700 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Mir6401-201ENSMUST00000184499 109 ntBASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim47Q8C0E3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms