Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 AC110380.1-201ENSMUST00000226987 389 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 AC112972.1-201ENSMUST00000227329 365 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Gm24928-201ENSMUST00000083399 107 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Gm25897-201ENSMUST00000083709 107 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Gm6361-201ENSMUST00000091031 435 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trerf1Q8BXJ2 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm22498-201ENSMUST00000104497 86 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm13170-201ENSMUST00000119716 643 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm26347-201ENSMUST00000157526 131 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm25665-201ENSMUST00000157695 110 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm24393-201ENSMUST00000158135 97 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm24211-201ENSMUST00000158264 107 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm26271-201ENSMUST00000158349 104 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm16134-201ENSMUST00000161714 336 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm26194-201ENSMUST00000175036 71 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Mir7031-201ENSMUST00000183860 65 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm8676-201ENSMUST00000184206 637 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm29641-201ENSMUST00000188955 259 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm38061-201ENSMUST00000192490 365 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm43884-201ENSMUST00000204251 559 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm18442-201ENSMUST00000220925 639 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm24150-201ENSMUST00000082759 104 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trerf1Q8BXJ2 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Mir208b-201ENSMUST00000104735 77 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm22091-201ENSMUST00000116908 127 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm14890-201ENSMUST00000117660 676 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm8757-201ENSMUST00000119660 372 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm14875-201ENSMUST00000120881 319 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm5391-201ENSMUST00000121155 613 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm25052-201ENSMUST00000122661 158 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm6969-201ENSMUST00000140065 342 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm23957-201ENSMUST00000157209 90 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm26085-201ENSMUST00000157900 116 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm29598-201ENSMUST00000188996 588 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm7041-201ENSMUST00000201227 524 ntBASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.67□□□□□ -1.66
Trerf1Q8BXJ2 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms