Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm38185-201ENSMUST00000193195 694 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm37375-201ENSMUST00000193859 387 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm37385-201ENSMUST00000195223 387 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm45857-201ENSMUST00000212207 356 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm45730-201ENSMUST00000212560 395 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.52□□□□□ -1.53
Ubp1Q811S7 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ubp1Q811S7 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm23839-201ENSMUST00000116957 109 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm15752-201ENSMUST00000117427 394 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm14880-201ENSMUST00000117581 292 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm11975-201ENSMUST00000118772 481 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm12850-201ENSMUST00000119210 436 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm11582-201ENSMUST00000121041 236 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm15167-201ENSMUST00000121997 187 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm14578-201ENSMUST00000122166 391 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm24409-201ENSMUST00000157881 152 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm26170-201ENSMUST00000158419 148 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm16125-201ENSMUST00000159003 339 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm17511-201ENSMUST00000172206 342 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21842-201ENSMUST00000177552 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21626-201ENSMUST00000177791 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21562-201ENSMUST00000177888 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21539-201ENSMUST00000177925 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21599-201ENSMUST00000178249 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21914-201ENSMUST00000178452 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21723-201ENSMUST00000178692 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21916-201ENSMUST00000178771 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21801-201ENSMUST00000178865 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21633-201ENSMUST00000178941 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21821-201ENSMUST00000179646 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21588-201ENSMUST00000180074 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21780-201ENSMUST00000180128 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21572-201ENSMUST00000180134 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm21529-201ENSMUST00000180175 498 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm29370-202ENSMUST00000187476 499 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm8419-201ENSMUST00000189886 412 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm20923-201ENSMUST00000190009 319 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm19193-201ENSMUST00000190263 590 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm36939-201ENSMUST00000194889 439 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm2926-201ENSMUST00000205625 239 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm44852-201ENSMUST00000207950 369 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm45252-201ENSMUST00000211579 397 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm46194-201ENSMUST00000218136 320 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Snord68-201ENSMUST00000082516 86 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.51□□□□□ -1.53
Ubp1Q811S7 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.51□□□□□ -1.53
Ubp1Q811S7 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm5362-201ENSMUST00000211968 3085 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms