Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm37761-201ENSMUST00000194989 2098 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Trim28Q62318 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim28Q62318 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim28Q62318 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim28Q62318 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim28Q62318 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim28Q62318 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim28Q62318 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim28Q62318 Gm12311-201ENSMUST00000118803 374 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm14307-201ENSMUST00000118930 291 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm14037-201ENSMUST00000120576 313 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm12486-201ENSMUST00000120887 541 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm14589-201ENSMUST00000121640 727 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm15141-201ENSMUST00000121860 729 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm14297-201ENSMUST00000129110 291 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm16236-201ENSMUST00000159588 379 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim28Q62318 Gm27254-201ENSMUST00000183926 517 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm37098-201ENSMUST00000192290 244 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm42451-201ENSMUST00000197410 244 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim28Q62318 Gm5034-201ENSMUST00000199115 634 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim28Q62318 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim28Q62318 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm29774-201ENSMUST00000219270 436 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim28Q62318 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 AC192333.2-201ENSMUST00000224771 196 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 AC117202.2-201ENSMUST00000226491 1101 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim28Q62318 Gm25005-201ENSMUST00000083812 156 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm24522-201ENSMUST00000083964 108 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm26107-201ENSMUST00000083972 107 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm7381-201ENSMUST00000098958 300 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim28Q62318 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim28Q62318 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim28Q62318 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim28Q62318 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.47□□□□□ -1.53
Trim28Q62318 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim28Q62318 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
Trim28Q62318 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Trim28Q62318 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.46□□□□□ -1.53
Trim28Q62318 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Trim28Q62318 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Trim28Q62318 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim28Q62318 Gm24281-201ENSMUST00000104234 136 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm23319-201ENSMUST00000104467 131 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim28Q62318 Gm15108-201ENSMUST00000116160 803 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm13268-201ENSMUST00000117485 433 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm11971-201ENSMUST00000117715 288 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm16412-201ENSMUST00000121602 273 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm9003-201ENSMUST00000121810 482 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm5924-201ENSMUST00000132554 871 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm2892-201ENSMUST00000145537 711 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim28Q62318 Gm10177-202ENSMUST00000161698 207 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm7346-201ENSMUST00000169661 476 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim28Q62318 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim28Q62318 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim28Q62318 Gm26993-201ENSMUST00000182766 789 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Mir6907-201ENSMUST00000183764 71 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm28343-201ENSMUST00000185386 112 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim28Q62318 Gm4644-201ENSMUST00000197587 400 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm44449-201ENSMUST00000203610 153 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm7468-201ENSMUST00000203900 652 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm44972-201ENSMUST00000206419 406 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.46□□□□□ -1.54
Trim28Q62318 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC5.46□□□□□ -1.54
Trim28Q62318 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 AC124399.1-201ENSMUST00000218334 590 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Trim28Q62318 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Trim28Q62318 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim28Q62318 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim28Q62318 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim28Q62318 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC5.46□□□□□ -1.54
Trim28Q62318 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.46□□□□□ -1.54
Trim28Q62318 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Trim28Q62318 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.46□□□□□ -1.54
Trim28Q62318 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC5.45□□□□□ -1.54
Trim28Q62318 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.45□□□□□ -1.54
Trim28Q62318 Svet1-201ENSMUST00000209370 3940 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms