Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Clec2j-201ENSMUST00000032517 515 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Mir218-2-201ENSMUST00000083649 110 ntBASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav3-1Q5R1I8 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm12112-201ENSMUST00000117772 231 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm15297-201ENSMUST00000117795 290 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm13488-201ENSMUST00000120419 179 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm12042-201ENSMUST00000120479 301 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm22223-201ENSMUST00000157360 125 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm26312-201ENSMUST00000157769 165 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm25433-201ENSMUST00000158283 286 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm25246-201ENSMUST00000175476 69 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm8807-201ENSMUST00000179328 492 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm27210-201ENSMUST00000184263 402 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm4854-201ENSMUST00000185902 574 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm29598-201ENSMUST00000188996 588 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm37436-201ENSMUST00000193842 1085 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm18462-201ENSMUST00000208112 417 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 AC153961.2-201ENSMUST00000218877 164 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 CT025552.2-201ENSMUST00000225497 317 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm23443-201ENSMUST00000082916 128 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm23136-201ENSMUST00000083425 99 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav3-1Q5R1I8 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm18913-201ENSMUST00000204311 1789 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm43178-201ENSMUST00000197257 1386 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm25526-201ENSMUST00000104332 132 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm14880-201ENSMUST00000117581 292 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm14836-201ENSMUST00000118567 471 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm11704-201ENSMUST00000120031 214 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm12998-201ENSMUST00000122445 789 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm25105-201ENSMUST00000122477 130 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm16533-201ENSMUST00000140035 228 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm22210-201ENSMUST00000158101 144 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm29332-201ENSMUST00000190829 227 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm5338-201ENSMUST00000209530 639 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm45485-201ENSMUST00000211229 357 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm2059-201ENSMUST00000212025 287 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm7045-201ENSMUST00000221466 605 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm18363-201ENSMUST00000221671 730 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 AC211878.2-201ENSMUST00000222486 488 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 AC133203.1-201ENSMUST00000228241 301 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Snord104-201ENSMUST00000083192 70 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm23096-201ENSMUST00000083447 107 ntBASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav3-1Q5R1I8 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms