Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Trav3-3Q5R1C3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Trav3-3Q5R1C3 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.84□□□□□ -1.96
Trav3-3Q5R1C3 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Trav3-3Q5R1C3 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm16089-201ENSMUST00000117679 336 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm11633-201ENSMUST00000118176 444 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm15126-201ENSMUST00000118631 833 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm11746-201ENSMUST00000119843 821 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm16458-201ENSMUST00000121428 502 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm15147-201ENSMUST00000122263 483 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm16363-201ENSMUST00000132460 877 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm22764-201ENSMUST00000158370 92 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm28976-201ENSMUST00000188070 144 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm44300-201ENSMUST00000196792 121 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm19243-201ENSMUST00000198592 269 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm44348-201ENSMUST00000200165 122 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm34091-201ENSMUST00000200875 604 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm44952-201ENSMUST00000204443 433 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm5322-201ENSMUST00000206142 699 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm18039-201ENSMUST00000217816 728 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Mecom-201ENSMUST00000061088 348 ntBASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Trav3-3Q5R1C3 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm24951-201ENSMUST00000102182 109 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm11366-201ENSMUST00000119279 429 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm15364-201ENSMUST00000119618 585 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm14908-201ENSMUST00000120930 1286 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm12858-201ENSMUST00000121913 208 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm17155-201ENSMUST00000165969 473 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm37098-201ENSMUST00000192290 244 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm43855-201ENSMUST00000197462 507 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm44757-201ENSMUST00000206373 157 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm6841-201ENSMUST00000220602 598 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Gm37655-201ENSMUST00000193968 4123 ntBASIC2.82□□□□□ -1.96
Trav3-3Q5R1C3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm23319-201ENSMUST00000104467 131 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm11898-201ENSMUST00000117161 385 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm16128-201ENSMUST00000117855 626 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm25177-201ENSMUST00000122634 117 ntBASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC2.81□□□□□ -1.96
Trav3-3Q5R1C3 Gm23234-201ENSMUST00000157304 134 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms