Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm26933-201ENSMUST00000182320 827 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Mir6385-201ENSMUST00000184295 105 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm28785-201ENSMUST00000187478 379 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm43601-201ENSMUST00000196294 945 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm42593-201ENSMUST00000198469 377 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm43478-201ENSMUST00000200381 292 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm39147-201ENSMUST00000211376 465 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 AC154692.1-201ENSMUST00000228314 544 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm10780-201ENSMUST00000099459 285 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim58Q5NCC9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm15142-201ENSMUST00000121013 856 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm15038-201ENSMUST00000122144 296 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm24914-201ENSMUST00000157285 313 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Mir5710-201ENSMUST00000176884 69 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm22910-201ENSMUST00000178568 132 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm27044-201ENSMUST00000183033 796 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm27535-201ENSMUST00000183814 157 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm38008-201ENSMUST00000195333 518 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm42625-201ENSMUST00000198611 922 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm43295-201ENSMUST00000201439 412 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm6230-201ENSMUST00000208077 780 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm2059-201ENSMUST00000212025 287 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm46996-201ENSMUST00000220924 408 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm23102-201ENSMUST00000083724 116 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.28□□□□□ -1.72
Trim58Q5NCC9 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm14229-201ENSMUST00000121178 850 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm14581-201ENSMUST00000121726 198 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm2892-201ENSMUST00000145537 711 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm3030-201ENSMUST00000163410 516 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm3339-201ENSMUST00000163462 475 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm38098-201ENSMUST00000194115 241 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm29704-201ENSMUST00000196011 253 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm7639-201ENSMUST00000212608 484 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm4987-201ENSMUST00000078326 408 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Gm25810-201ENSMUST00000082752 108 ntBASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim58Q5NCC9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Trim58Q5NCC9 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms