Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm44310-201ENSMUST00000175424 126 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm22639-201ENSMUST00000175591 125 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm24979-201ENSMUST00000178626 126 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm27743-201ENSMUST00000185136 126 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf3bQ3ULL6 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Mir92b-201ENSMUST00000102300 83 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm14927-201ENSMUST00000120283 454 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm25292-201ENSMUST00000122797 322 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm2892-201ENSMUST00000145537 711 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm6486-201ENSMUST00000166202 434 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm17177-201ENSMUST00000169144 483 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm27718-201ENSMUST00000183721 86 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm27535-201ENSMUST00000183814 157 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm17966-201ENSMUST00000193453 594 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Trbv27-201ENSMUST00000193711 277 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm2189-201ENSMUST00000201419 429 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm43124-201ENSMUST00000201878 278 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm42758-201ENSMUST00000202146 283 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm18441-201ENSMUST00000223539 617 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.7□□□□□ -1.82
Upf3bQ3ULL6 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm14905-201ENSMUST00000122351 639 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Mir1934-201ENSMUST00000158127 83 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Mir5098-201ENSMUST00000175320 82 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm8807-201ENSMUST00000179328 492 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm35405-201ENSMUST00000218754 400 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm8785-201ENSMUST00000220259 487 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Upf3bQ3ULL6 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm13122-201ENSMUST00000118380 453 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm13167-201ENSMUST00000118554 578 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm11890-201ENSMUST00000119585 417 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm11829-201ENSMUST00000121003 282 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm12755-201ENSMUST00000122297 282 ntBASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.68□□□□□ -1.82
Upf3bQ3ULL6 Gm25667-201ENSMUST00000157701 275 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms