Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm14831-201ENSMUST00000120253 409 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm16250-201ENSMUST00000148974 256 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm5699-201ENSMUST00000152491 723 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm24419-201ENSMUST00000157875 332 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm20656-201ENSMUST00000176925 518 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm25314-201ENSMUST00000178810 79 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm8532-201ENSMUST00000179174 461 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm27190-201ENSMUST00000184890 542 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm4854-201ENSMUST00000185902 574 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm28408-201ENSMUST00000191557 463 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm17951-201ENSMUST00000198536 496 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm43825-201ENSMUST00000199650 734 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm44161-201ENSMUST00000203532 253 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm44817-201ENSMUST00000205416 453 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Col6a1Q04857 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm24764-201ENSMUST00000083686 199 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a1Q04857 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col6a1Q04857 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.67□□□□□ -1.5
Col6a1Q04857 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm25097-201ENSMUST00000104042 145 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm12281-201ENSMUST00000119536 298 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm14364-201ENSMUST00000129209 267 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm24059-201ENSMUST00000157493 312 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm23906-201ENSMUST00000157573 128 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm25348-201ENSMUST00000158961 111 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm17538-201ENSMUST00000168236 327 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm22621-201ENSMUST00000179678 74 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Mir6391-201ENSMUST00000184391 104 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm27492-201ENSMUST00000185194 187 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm18505-201ENSMUST00000187360 790 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm37961-201ENSMUST00000192729 299 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm36984-201ENSMUST00000192770 235 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm17781-201ENSMUST00000195232 649 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm43083-201ENSMUST00000199594 476 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm32308-201ENSMUST00000203053 280 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm19096-201ENSMUST00000209705 766 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm3816-201ENSMUST00000209803 433 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm7786-201ENSMUST00000210494 436 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm19921-201ENSMUST00000210505 703 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm45439-201ENSMUST00000211723 359 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm18120-201ENSMUST00000220079 511 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a1Q04857 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm4017-201ENSMUST00000084813 338 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm16261-201ENSMUST00000096813 205 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a1Q04857 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a1Q04857 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a1Q04857 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Col6a1Q04857 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.66□□□□□ -1.5
Col6a1Q04857 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms