Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col8a1Q00780 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col8a1Q00780 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col8a1Q00780 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.49□□□□□ -1.69
Col8a1Q00780 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Col8a1Q00780 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm24544-201ENSMUST00000103862 110 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm11577-201ENSMUST00000118030 737 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm11890-201ENSMUST00000119585 417 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm13717-201ENSMUST00000119868 365 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col8a1Q00780 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm25334-201ENSMUST00000158036 110 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm26746-201ENSMUST00000181722 487 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm27161-201ENSMUST00000183960 562 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm21856-201ENSMUST00000187547 696 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm33973-201ENSMUST00000195148 534 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm43315-201ENSMUST00000198120 313 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm43441-201ENSMUST00000201458 205 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm44431-201ENSMUST00000203500 413 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm44858-201ENSMUST00000207360 154 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm8423-201ENSMUST00000211387 607 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm23733-201ENSMUST00000083750 106 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col8a1Q00780 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col8a1Q00780 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.48□□□□□ -1.69
Col8a1Q00780 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm25088-201ENSMUST00000101803 79 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm22834-201ENSMUST00000102021 79 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm23193-201ENSMUST00000102427 82 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm5942-201ENSMUST00000120046 439 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm14037-201ENSMUST00000120576 313 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm12693-201ENSMUST00000121965 483 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm25291-201ENSMUST00000122795 144 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm23465-201ENSMUST00000157134 262 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm23124-201ENSMUST00000157650 107 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm25865-201ENSMUST00000158247 104 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm22765-201ENSMUST00000158371 128 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm23016-201ENSMUST00000158431 62 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm8207-201ENSMUST00000171204 502 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm27611-201ENSMUST00000184690 108 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm28666-201ENSMUST00000186649 274 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm29196-201ENSMUST00000189239 618 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm2719-201ENSMUST00000191929 444 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm2367-201ENSMUST00000192374 472 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm37746-201ENSMUST00000193249 198 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm17956-201ENSMUST00000199931 838 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm42475-201ENSMUST00000201212 295 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm44523-201ENSMUST00000205616 417 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms