Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm22023-201ENSMUST00000104354 130 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm14622-201ENSMUST00000117117 468 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm12722-201ENSMUST00000118507 493 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm12222-201ENSMUST00000121368 260 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm24936-201ENSMUST00000122598 247 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm22034-201ENSMUST00000157283 134 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm24138-201ENSMUST00000157572 114 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm4479-201ENSMUST00000178807 171 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm29576-201ENSMUST00000188020 678 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm28354-201ENSMUST00000190904 678 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm38356-201ENSMUST00000194313 408 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm37575-201ENSMUST00000195467 309 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm7946-201ENSMUST00000203326 958 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm44845-201ENSMUST00000208773 335 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.02□□□□□ -1.93
Nkx3-1P97436 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm336-201ENSMUST00000186376 1480 ntBASIC3.02□□□□□ -1.93
Nkx3-1P97436 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm12025-201ENSMUST00000117768 144 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm11350-201ENSMUST00000121436 870 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm26254-201ENSMUST00000122491 118 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm27580-201ENSMUST00000183666 149 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm37996-201ENSMUST00000191859 367 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm20177-201ENSMUST00000203705 334 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm18597-201ENSMUST00000209519 694 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm45710-201ENSMUST00000212847 215 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Nkx3-1P97436 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.01□□□□□ -1.93
Nkx3-1P97436 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3□□□□□ -1.93
Nkx3-1P97436 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Nkx3-1P97436 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3□□□□□ -1.93
Nkx3-1P97436 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm26145-201ENSMUST00000104476 127 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm14681-201ENSMUST00000118047 411 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm12412-201ENSMUST00000121867 328 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm23257-201ENSMUST00000158322 132 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm24520-201ENSMUST00000179510 110 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3□□□□□ -1.93
Nkx3-1P97436 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm5829-201ENSMUST00000191383 351 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm37543-201ENSMUST00000192443 1031 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm37701-201ENSMUST00000192947 1100 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm4859-201ENSMUST00000199625 787 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3□□□□□ -1.93
Nkx3-1P97436 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3□□□□□ -1.93
Nkx3-1P97436 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm37672-201ENSMUST00000192682 4014 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Nkx3-1P97436 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
Nkx3-1P97436 Gm37064-201ENSMUST00000193851 2231 ntBASIC3□□□□□ -1.93
Nkx3-1P97436 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Nkx3-1P97436 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms