Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm7266-201ENSMUST00000187999 405 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm9443-201ENSMUST00000188406 816 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm28061-201ENSMUST00000189085 807 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm38011-201ENSMUST00000193312 279 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm42428-201ENSMUST00000198677 302 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm3010-201ENSMUST00000198805 448 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.76□□□□□ -1.65
Sf3b6P59708 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm17989-201ENSMUST00000211543 412 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm2829-201ENSMUST00000213121 499 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm18442-201ENSMUST00000220925 639 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 AC114572.1-201ENSMUST00000227262 300 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sf3b6P59708 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm25929-201ENSMUST00000082784 107 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm26263-201ENSMUST00000083281 164 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm25818-201ENSMUST00000083282 164 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Sf3b6P59708 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Sf3b6P59708 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sf3b6P59708 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sf3b6P59708 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.76□□□□□ -1.65
Sf3b6P59708 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.76□□□□□ -1.65
Sf3b6P59708 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm15112-201ENSMUST00000120152 860 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm6175-201ENSMUST00000121351 400 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm14761-201ENSMUST00000121363 262 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm24719-201ENSMUST00000157520 110 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm20526-201ENSMUST00000173416 158 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm23793-201ENSMUST00000179396 117 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm4842-201ENSMUST00000183237 835 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Mir7211-201ENSMUST00000184071 63 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm28640-201ENSMUST00000190918 550 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm44360-201ENSMUST00000200081 82 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm8039-201ENSMUST00000204758 712 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm8319-201ENSMUST00000205708 641 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm44539-201ENSMUST00000206010 238 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm45614-201ENSMUST00000209994 721 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Snord68-201ENSMUST00000082516 86 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.75□□□□□ -1.65
Sf3b6P59708 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sf3b6P59708 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sf3b6P59708 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm13672-201ENSMUST00000117554 459 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm11346-201ENSMUST00000118346 704 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm11813-201ENSMUST00000118586 291 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm14972-201ENSMUST00000121780 364 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm9428-201ENSMUST00000127214 769 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm22804-201ENSMUST00000158052 101 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm23312-201ENSMUST00000158774 102 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Gm24518-201ENSMUST00000180275 94 ntBASIC4.74□□□□□ -1.65
Sf3b6P59708 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms