Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NcanP55066 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NcanP55066 Gm15026-201ENSMUST00000119219 458 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm16021-201ENSMUST00000121176 219 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.19□□□□□ -1.74
NcanP55066 Gm22084-201ENSMUST00000157585 105 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm5277-201ENSMUST00000164923 556 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm25037-201ENSMUST00000175418 110 ntBASIC4.19□□□□□ -1.74
NcanP55066 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.19□□□□□ -1.74
NcanP55066 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.19□□□□□ -1.74
NcanP55066 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NcanP55066 Gm26746-201ENSMUST00000181722 487 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm29610-201ENSMUST00000187749 453 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm37533-201ENSMUST00000193848 545 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm37709-201ENSMUST00000195074 600 ntBASIC4.19□□□□□ -1.74
NcanP55066 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm43992-201ENSMUST00000204358 197 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm45071-201ENSMUST00000205353 571 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm44857-201ENSMUST00000208331 196 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm45710-201ENSMUST00000212847 215 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm46233-201ENSMUST00000217831 449 ntBASIC4.19□□□□□ -1.74
NcanP55066 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.19□□□□□ -1.74
NcanP55066 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.19□□□□□ -1.74
NcanP55066 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.19□□□□□ -1.74
NcanP55066 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.19□□□□□ -1.74
NcanP55066 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.19□□□□□ -1.74
NcanP55066 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NcanP55066 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NcanP55066 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.19□□□□□ -1.74
NcanP55066 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
NcanP55066 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NcanP55066 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NcanP55066 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
NcanP55066 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NcanP55066 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
NcanP55066 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NcanP55066 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NcanP55066 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NcanP55066 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NcanP55066 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NcanP55066 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NcanP55066 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.18□□□□□ -1.74
NcanP55066 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NcanP55066 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NcanP55066 Gm25308-201ENSMUST00000104171 158 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm15001-201ENSMUST00000117657 795 ntBASIC4.18□□□□□ -1.74
NcanP55066 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm15060-201ENSMUST00000119550 948 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm11414-201ENSMUST00000121795 263 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm23668-201ENSMUST00000157465 111 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm23179-201ENSMUST00000158693 304 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm25369-201ENSMUST00000158848 132 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.18□□□□□ -1.74
NcanP55066 Gm20656-201ENSMUST00000176925 518 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm28010-201ENSMUST00000179485 126 ntBASIC4.18□□□□□ -1.74
NcanP55066 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NcanP55066 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.18□□□□□ -1.74
NcanP55066 Trbv7-201ENSMUST00000193339 402 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.18□□□□□ -1.74
NcanP55066 Gm20948-201ENSMUST00000211091 449 ntBASIC4.18□□□□□ -1.74
NcanP55066 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.18□□□□□ -1.74
NcanP55066 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.18□□□□□ -1.74
NcanP55066 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NcanP55066 Gm4945-201ENSMUST00000075152 453 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm22043-201ENSMUST00000082993 158 ntBASIC4.18□□□□□ -1.74
NcanP55066 Gm26176-201ENSMUST00000083795 105 ntBASIC4.18□□□□□ -1.74
NcanP55066 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NcanP55066 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NcanP55066 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NcanP55066 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NcanP55066 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NcanP55066 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
NcanP55066 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NcanP55066 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NcanP55066 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NcanP55066 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NcanP55066 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.18□□□□□ -1.74
NcanP55066 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.18□□□□□ -1.74
NcanP55066 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NcanP55066 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NcanP55066 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NcanP55066 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.17□□□□□ -1.74
NcanP55066 Gm22674-201ENSMUST00000104413 131 ntBASIC4.17□□□□□ -1.74
NcanP55066 Gm6274-201ENSMUST00000118173 797 ntBASIC4.17□□□□□ -1.74
NcanP55066 Gm12902-201ENSMUST00000118389 322 ntBASIC4.17□□□□□ -1.74
NcanP55066 Gm14926-201ENSMUST00000120650 508 ntBASIC4.17□□□□□ -1.74
NcanP55066 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NcanP55066 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.17□□□□□ -1.74
NcanP55066 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC4.17□□□□□ -1.74
NcanP55066 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
NcanP55066 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NcanP55066 Gm22310-201ENSMUST00000157509 116 ntBASIC4.17□□□□□ -1.74
NcanP55066 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NcanP55066 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NcanP55066 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.17□□□□□ -1.74
NcanP55066 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC4.17□□□□□ -1.74
NcanP55066 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms